Pairwise Alignments

Query, 236 a.a., 3'-5' exonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 228 a.a., DNA polymerase III epsilon subunit-related 3'-5' exonuclease-like protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  102 bits (254), Expect = 6e-27
 Identities = 70/188 (37%), Positives = 100/188 (53%), Gaps = 7/188 (3%)

Query: 47  LVALDFETTGLNAEQDAIVSIGLVPFTTQRIFLSQARYWLVKPSQPLEDESIVFHGITHS 106
           ++ALD E TGL+  +D I++IG+VP     I L  A   LV+  Q    +S V HGIT  
Sbjct: 43  MLALDLEMTGLDPGRDQILAIGVVPIDGGIIQLQGAESVLVE-IQGSVGQSAVIHGITDR 101

Query: 107 ELQHAQAPEQVLKELLEALHGKIVVVHFRHIERDFLRQISLNIWGEAIEFPVLDTLEIER 166
           EL +A      +  L++ ++G+I+V H   ++  F+R       G ++    +DTL +ER
Sbjct: 102 ELHNALPLADAMNWLMQKMNGRILVAHHAPLDLAFIRANMSRSLGISMPMLAIDTLALER 161

Query: 167 QLLDKQRSLWQRIARRPLPSIRLGQSRMRYHLPPYSPHHALTDAIATAELFQAQCAHHLP 226
           Q L +     Q        S+RLG SR RY LP Y  H+ALTDA++ AEL  AQ A    
Sbjct: 162 QRLLRIHDAIQE------GSLRLGASRQRYGLPVYDAHNALTDALSCAELLLAQLAAIGG 215

Query: 227 PHTAIQSL 234
            HT +  L
Sbjct: 216 AHTRVAEL 223