Pairwise Alignments

Query, 236 a.a., 3'-5' exonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 209 a.a., Exonuclease (NCBI) from Rhodospirillum rubrum S1H

 Score = 56.2 bits (134), Expect = 5e-13
 Identities = 38/178 (21%), Positives = 76/178 (42%), Gaps = 12/178 (6%)

Query: 41  PIHQCSLVALDFETTGLNAEQDAIVSIGLVPFTTQRIFLSQARYWLVKPSQPLEDESIVF 100
           P  +  +V++D ETTGL+   D I+++  V     R+  SQ    +VKPS+P+  +++  
Sbjct: 25  PAPEGEVVSVDCETTGLDRHNDDIITLAAVRVRGNRVLTSQKLDLVVKPSRPIRRDAVCI 84

Query: 101 HGITHSELQHAQAPEQVLKELLEALHGKIVVVHFRHIERDFLRQISLNIWGEAIEFPVLD 160
           H +   +++   AP + +   L     + ++ ++   +   + ++     G  +  P   
Sbjct: 85  HHLREQDVERGLAPREAVARFLRFAGSRPLIGYYLEFDVALIDRLVRPWLGIGLPNP--- 141

Query: 161 TLEIERQLLDKQRSLWQRIARRPL----PSIRLGQSRMRYHLPPYSPHHALTDAIATA 214
            +E+     D     W+   R  L      +R         +PP   H A  DA+ T+
Sbjct: 142 RIEVSEMFYD-----WRTRGREELYTGTVDLRFATILEALDIPPLHNHDAFEDAVMTS 194