Pairwise Alignments

Query, 236 a.a., 3'-5' exonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 242 a.a., DNA polymerase III, epsilon subunit (RefSeq) from Shewanella loihica PV-4

 Score = 44.7 bits (104), Expect = 2e-09
 Identities = 46/180 (25%), Positives = 77/180 (42%), Gaps = 22/180 (12%)

Query: 48  VALDFETTGLNAEQDA------IVSIGLVPFTTQRIFLSQARYWLVKPSQPLEDESIVFH 101
           V LD ETTG+N    A      I+ IG V    +++   +  +  + P Q +++E+I  H
Sbjct: 11  VILDTETTGMNQGAGAVYFGHRIIEIGCVEVINRKL-TGRHFHEYINPMQAIDEEAITVH 69

Query: 102 GITHSELQHAQAPEQVLKELLEALHGKIVVVHFRHIERDFLRQISLNIWGEAIE----FP 157
           GIT+  +       Q+    LE + G  +V H  + +  F+      +     +      
Sbjct: 70  GITNEFVADKPVFAQIAPAFLEFIDGAEIVAHNANFDVSFMDHEFSLLTPRGPKTTDICQ 129

Query: 158 VLDTLEIERQLLDKQRSLWQRIARRPLPSIRLGQSRMRYHLPPYSPHHALTDAIATAELF 217
           VLD+LEI + L   Q++    + +      R G    R  L     H AL DA   A+++
Sbjct: 130 VLDSLEIAKFLHPGQKNNLDALCK------RYGIDNSRREL-----HGALLDAEILADVY 178