Pairwise Alignments

Query, 236 a.a., 3'-5' exonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 239 a.a., DNA polymerase III subunit epsilon (RefSeq) from Shewanella loihica PV-4

 Score =  211 bits (538), Expect = 8e-60
 Identities = 105/229 (45%), Positives = 152/229 (66%), Gaps = 1/229 (0%)

Query: 8   AIYWPARFAHLAQQARQTHLQRFYAQPLVEGSTPIHQCSLVALDFETTGLNAEQDAIVSI 67
           +I WP +F    +      L+++Y   L +  TP+ +  L+A+DFETTGLN ++D IVSI
Sbjct: 10  SIDWPGKFEQRLKTTEHQGLRQYYLGGLPDPDTPLAEVELLAMDFETTGLNVDKDDIVSI 69

Query: 68  GLVPFTTQRIFLSQARYWLVKPSQPLEDESIVFHGITHSELQHAQAPEQVLKELLEALHG 127
           G VPFT +RIFL++A++W V+P + L +ES++ HGITHS++  A     + +++LE + G
Sbjct: 70  GTVPFTLRRIFLNRAQHWTVRPREQLAEESVIIHGITHSDILDAPDLSAIFEQVLEQMAG 129

Query: 128 KIVVVHFRHIERDFLRQISLNIWGEAIEFPVLDTLEIERQLLDKQR-SLWQRIARRPLPS 186
           KI+VVH++ IER FL +  +    + IEFP++DT+ +E ++  +Q   L QR+      S
Sbjct: 130 KIMVVHYQAIERLFLERALIRRIHQGIEFPLIDTMALESEIQKRQHGGLLQRLKGDKPGS 189

Query: 187 IRLGQSRMRYHLPPYSPHHALTDAIATAELFQAQCAHHLPPHTAIQSLW 235
           +RLGQSR RY LP Y PH+ALTDAIATAEL QAQ AHH  P   I+  W
Sbjct: 190 VRLGQSRSRYGLPSYPPHNALTDAIATAELLQAQIAHHFDPSRPIKEFW 238