Pairwise Alignments

Query, 236 a.a., 3'-5' exonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 237 a.a., DNA polymerase III epsilon subunit-like 3'-5' exonuclease from Dechlorosoma suillum PS

 Score = 47.8 bits (112), Expect = 2e-10
 Identities = 51/219 (23%), Positives = 88/219 (40%), Gaps = 18/219 (8%)

Query: 11  WPARFAH-------LAQQARQTHLQRFYAQPLVEGSTPIHQCSLVALDFETTGLNAEQDA 63
           W ARF         L+ + R+  L+R+   P  + +    Q   V +D E++GLN  +D 
Sbjct: 3   WLARFFRSKKPEVVLSPEQRE-RLERWQQLPDPDLNHSHFQTRYVVVDVESSGLNMVKDR 61

Query: 64  IVSIGLVPFTTQRIFLSQARYWLVKPSQPLEDESIVFHGITHSELQHAQAPEQVLKELLE 123
           ++SIG V      I    A   ++K     +  +I+ HGI  S  +    P   L   LE
Sbjct: 62  LISIGAVAVVNGLIDTQDAFEVILKQEVVSDTANILLHGIGGSAQREGMEPADALLLFLE 121

Query: 124 ALHGKIVVVHFRHIERDFLRQISLNIWGEAIEFPVLDTLEIERQLLDKQRSLWQRIARRP 183
            +    +V +    +   + +      G          +E E+Q LD    + +    R 
Sbjct: 122 YIGKCPLVAYHAMFDHSMIARAMEKYLG----------IEFEQQWLDLAWIMPELFQDRI 171

Query: 184 LPSIRLGQSRMRYHLPPYSPHHALTDAIATAELFQAQCA 222
             ++ L      + +     H+A++D  ATA+L Q   A
Sbjct: 172 DTNVALDAWLNLFGIENIQRHNAVSDCYATAKLLQVAMA 210