Pairwise Alignments

Query, 236 a.a., 3'-5' exonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 235 a.a., DNA polymerase III, epsilon subunit from Marinobacter adhaerens HP15

 Score = 58.9 bits (141), Expect = 8e-14
 Identities = 49/191 (25%), Positives = 79/191 (41%), Gaps = 26/191 (13%)

Query: 34  PLVEGSTPIHQCSLVALDFETTGLNAEQDAIVSIGLVPFTTQRIFLSQARYWLVKPSQPL 93
           P   G   +  C L+ LD ETTGLN  +D +++IG V      I L      +++  +  
Sbjct: 28  PKTPGEQLLTDCRLIVLDLETTGLNPSKDEVIAIGAVAIRGGIIHLGDQFDLILRRPELD 87

Query: 94  EDESIVFHGITHSELQHAQAPEQVLKELLEALHGKIVVVHFRHIERDFLRQISLNIWGEA 153
             E+++ HGI    L      E  L  LLE ++G  ++ +    ++ FL +         
Sbjct: 88  IRETVLIHGIGPEALTQGHEIEDALLYLLEWMNGDPILAYHSAFDQKFLEK--------- 138

Query: 154 IEFPVLDTLEIERQLLDKQRSLWQRIARRP---LPSIRLGQSRM-----RYHLPPYSPHH 205
                     ++ QL   Q   W  +A       P+ + G   +      + L     HH
Sbjct: 139 ---------TLKAQLGYTQPHTWMDVADLMPAFFPNTKTGGKGLDNWADYFGLEVSERHH 189

Query: 206 ALTDAIATAEL 216
           A +DA+ATAEL
Sbjct: 190 AASDALATAEL 200