Pairwise Alignments

Query, 236 a.a., 3'-5' exonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 181 a.a., exonuclease (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  107 bits (268), Expect = 1e-28
 Identities = 67/173 (38%), Positives = 99/173 (57%), Gaps = 7/173 (4%)

Query: 50  LDFETTGLNAEQDAIVSIGLVPFTTQRIFLSQARYWLVKPSQPLEDESIVFHGITHSELQ 109
           +D E TGL+  +D I+SIGLVP     I LS A+  LV+    +  +S + HGI  + L 
Sbjct: 1   MDLEMTGLDPFKDQILSIGLVPIENGAIPLSHAQQKLVQIRGSV-GQSAIIHGILDNHLT 59

Query: 110 HAQAPEQVLKELLEALHGKIVVVHFRHIERDFLRQISLNIWGEAIEFPVLDTLEIERQLL 169
            A + E+ +   +E   G+++V H   ++  FL+Q  L I+ +A+  P +DTL +E+Q L
Sbjct: 60  QAVSIEEAMAWFMEQTRGRVLVAHHSPLDCRFLQQDILTIYHQAVLLPAIDTLVLEKQRL 119

Query: 170 DKQRSLWQRIARRPLPSIRLGQSRMRYHLPPYSPHHALTDAIATAELFQAQCA 222
            ++ S+ +        S+RLG  R RY LP Y  H ALTDA+A AEL  AQ A
Sbjct: 120 LREHSVLKE------GSLRLGACRERYGLPIYGAHSALTDALACAELLLAQVA 166