Pairwise Alignments

Query, 236 a.a., 3'-5' exonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 242 a.a., DNA polymerase III, epsilon subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 50.4 bits (119), Expect = 3e-11
 Identities = 49/182 (26%), Positives = 82/182 (45%), Gaps = 26/182 (14%)

Query: 48  VALDFETTGLNAEQDA------IVSIGLVPFTTQRIFLSQARYW--LVKPSQPLEDESIV 99
           V LD ETTG+N    A      I+ IG V    +R+     RY+   + P Q ++ E+I 
Sbjct: 11  VILDTETTGMNQGSGAVYLGHRIIEIGCVEVINRRL---TGRYYHQYINPGQAIDPEAIA 67

Query: 100 FHGITHSELQHAQAPEQVLKELLEALHGKIVVVHFRHIERDFL-RQIS-LNIWGEAIE-- 155
            HGIT   + +     Q+ +E ++ + G  +V H  + +  F+  + S L   G      
Sbjct: 68  VHGITDERVANEPRFHQIAQEFIDFISGAEIVAHNANFDVSFMDHEFSLLQPLGPKTRDI 127

Query: 156 FPVLDTLEIERQLLDKQRSLWQRIARRPLPSIRLGQSRMRYHLPPYSPHHALTDAIATAE 215
             +LD+L+I + L   Q++    + +R      +  SR  Y       H AL DA   A+
Sbjct: 128 CEILDSLDIAKFLHPGQKNNLDALCKR----YGIDNSRRHY-------HGALLDAEILAD 176

Query: 216 LF 217
           ++
Sbjct: 177 VY 178