Pairwise Alignments

Query, 236 a.a., 3'-5' exonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 228 a.a., exonuclease, RNase T and DNA polymerase III (RefSeq) from Shewanella sp. ANA-3

 Score =  110 bits (276), Expect = 2e-29
 Identities = 74/189 (39%), Positives = 103/189 (54%), Gaps = 9/189 (4%)

Query: 34  PLVEGSTPIHQCSLVALDFETTGLNAEQDAIVSIGLVPFTTQRIFLSQARYWLVKPSQPL 93
           PL+E   PI +  L+A+D E TGLN  QD I+SIGLVP     I L  A+  LV+  Q  
Sbjct: 31  PLLE--LPISRAPLIAMDLEMTGLNPLQDQILSIGLVPIENGAIPLMGAQQKLVQ-IQGS 87

Query: 94  EDESIVFHGITHSELQHAQAPEQVLKELLEALHGKIVVVHFRHIERDFLRQISLNIWGEA 153
             +S   HGI  + L  A   E+ +   +    G ++V H   ++  FL+Q  L+I+ +A
Sbjct: 88  VGQSATIHGILDNHLTEAVTIEEAMAWFVAQTRGHVLVAHHSPLDCRFLQQDILSIYHQA 147

Query: 154 IEFPVLDTLEIERQLLDKQRSLWQRIARRPLPSIRLGQSRMRYHLPPYSPHHALTDAIAT 213
           I  P +DTL +E+  L ++ S+ +        S+RLG  R RY LP Y  H ALTDA+A 
Sbjct: 148 IVLPAIDTLLLEKHRLLREHSVLKE------GSLRLGACRERYGLPIYGAHSALTDALAC 201

Query: 214 AELFQAQCA 222
            EL  AQ A
Sbjct: 202 GELLLAQVA 210