Pairwise Alignments

Query, 631 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., Chemotactic transducer from Pseudomonas fluorescens FW300-N2E2

 Score =  290 bits (741), Expect = 2e-82
 Identities = 208/644 (32%), Positives = 316/644 (49%), Gaps = 34/644 (5%)

Query: 5   MKLTLKHK-LIGASLSAVVVMATALTW--FSASQLQQQTSNAVYTRADAISSTAAKGISD 61
           + L   HK L+GA    V+VMA  L++  F+  + Q  T  A++    A        +  
Sbjct: 3   INLKFGHKILLGA---CVIVMAVFLSFSLFNDHRQQASTREALHRNLQATGQLLGANLDS 59

Query: 62  WISIR----KSISTAFNAHIEAQNVVPYLQQARNAGGFDDIFYGTTDGAMYRSHPERNRA 117
           W++ R    +  +    A    Q +   L Q      F   + G  D   +  HPER   
Sbjct: 60  WLAGRILLIEGAAETIAADPTPQTIGAILSQDIITKTFIASYVGLEDSRFF-IHPERVMP 118

Query: 118 D-YDPRTRPWYKDAASAGKQIITTAYSDAITGALLVTIAEPVRLNGNMSGVVGADVLIDQ 176
           D YD R R WYKDAA + + ++T  Y  A    L++T A P++++G   GV+GA + ++Q
Sbjct: 119 DGYDVRQRAWYKDAARSLEPVLTEPYIGAGIDYLIMTQAAPIKVDGKAVGVLGASLSLEQ 178

Query: 177 LIADVISMDAGKNAQTMLIDGQNGSFLAHPDKSLLLKPVTTLSSALDMR--TIERAANQG 234
           L   + ++D        L+   +G  L HPD + + K   TL+ A      +I  A N+ 
Sbjct: 179 LAKIINAVDLNGIGYAFLVS-DDGKILVHPDNTRVTK---TLAQAFPEGPPSINSALNE- 233

Query: 235 ELLALKLNGVEKFFFFTAV---PDTPWYFAVQMDSDTEYASHSELLTGLITTALLITVIV 291
               ++ NG  +   FT +   P   W   + +D D  YA         +   L+  ++ 
Sbjct: 234 ----VQENGRTRIVTFTPINGLPSLHWSIGLSVDKDKAYAVLHAFRASALVATLIAMLVT 289

Query: 292 VVIVSWLVSFLFRDLGRVSKALEEIASGDADLTQRLEPRSDDEVGQLASNFNTFVSNMHT 351
           V ++  L++ L R L  +  A++ IA G+ DLTQRL   S DE G +A  FN FV  +  
Sbjct: 290 VGLLGLLINALMRPLRSMGSAMQSIADGEGDLTQRLHSLSRDEFGMMAGGFNRFVERIQQ 349

Query: 352 MVLKLSHVSAALAQQSKVTAAQAEERSSRIRLQQDE----INMVATAINEMAAATQEIAG 407
            + ++   S  L Q     AAQ  + S+      D      + VATAINE+ AA QEIA 
Sbjct: 350 SIREVLASSVQLTQ----LAAQVSQASNASLKSSDTQAALTHNVATAINELGAAAQEIAR 405

Query: 408 NADHTAQNAGEAVTACVHGAGQVTQTQRSIQSLAEEVQVATEVIQELEAHGHQISTILST 467
           +A H +  A +       G   V ++  ++  L+ +V    + I+ L     +I  IL  
Sbjct: 406 SAAHASSRASDTRDQTQEGQSVVQRSISAMSQLSSQVVNTRQDIESLNEKTLKIGRILDV 465

Query: 468 IQNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTKEIQQMIETLQAT 527
           I+ I++QTNLLALNAAIEAARAG+ GRGFAVV+DEVR L+ RT  S +EI  MIE LQA 
Sbjct: 466 IKGISDQTNLLALNAAIEAARAGDAGRGFAVVSDEVRTLAHRTQQSAQEIHSMIEELQAG 525

Query: 528 TGKAVGIMDDSRRLADTSVDDANEASVSLEQIHKTVERISDMATQIASAAEEQASVTSEI 587
            G AV  M +S+R +D +V  A  A   L ++   +  I ++   +A+A EEQ SV   +
Sbjct: 526 AGSAVSAMLESQRHSDDNVTTARLAGERLNRVLMGIGEIDEINLSVATATEEQTSVVDNL 585

Query: 588 TRNTVGIRDVSNDLAQEAHSAAEQAAELSELSHELEQEIRRFKL 631
            R+   I D++ ++     S  +   EL   S  L+Q +  FK+
Sbjct: 586 DRDISHINDLNQEMVGNLQSTLQACTELENQSRRLQQMVNTFKI 629