Pairwise Alignments

Query, 631 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 626 a.a., Chemotactic transducer from Pseudomonas fluorescens FW300-N2E2

 Score =  309 bits (792), Expect = 2e-88
 Identities = 207/643 (32%), Positives = 334/643 (51%), Gaps = 33/643 (5%)

Query: 5   MKLTLKHKLIGASLSAVVVMATALTWFSASQLQQQT-SNAVYTRADAISSTAAKGISDWI 63
           M L   HK++ A+ S VVV+A AL       LQ+ T  +++ +  +      A  I +W+
Sbjct: 1   MNLKFSHKILLAA-SGVVVLAFALFTLYNDYLQRNTIGSSLESSIEQSGDLTASSIQNWM 59

Query: 64  SIRKSISTAFNAHIEAQNVVPYL----QQARNAGGFDDIFYGTTDGAMYRSHPERNRAD- 118
           S R  +      +I  Q     L     Q      F   + G  +G ++   P+    D 
Sbjct: 60  SGRILVLENLAQNIAHQGTAADLPGLVDQPALTSNFQFTYVGQANG-VFTQRPDAKMPDG 118

Query: 119 YDPRTRPWYKDAASAGKQIITTAYSDAITGALLVTIAEPVRLNGNMSGVVGADVLIDQLI 178
           YDPR RPWYK A +A K ++T  Y  A+ G L+VT+A PV+ NG + GVVG D+ ++ L+
Sbjct: 119 YDPRQRPWYKQAVTADKTMLTPPYLAAV-GGLVVTVALPVKHNGELLGVVGGDLSLETLV 177

Query: 179 ADVISMDAGKNAQTMLIDGQNGSFLAHPDKSLLLKPVTTLSSALDMRTIERAANQGELLA 238
             + S+D G      L+ G +G  +  PDK  ++K +  +     +R  +   +      
Sbjct: 178 KIINSVDFGGIGHAFLVSG-DGQVIVSPDKDQVMKNLKDIYPGTPVRIGKGIQD------ 230

Query: 239 LKLNGVEKFFFFTAV---PDTPWYFAVQMDSDTEYASHSELLTGLITTALLITVIVVVIV 295
           ++LNG ++   FT V   P+  WY  + +D    YA  S+  T  +    +    + +++
Sbjct: 231 VELNGQDRILSFTPVTGLPNAEWYIGLSIDKAKAYAPLSQFRTSALIAMFVAVAAIALLL 290

Query: 296 SWLVSFLFRDLGRVSKALEEIASGDADLTQRLEPRSDDEVGQLASNFNTFVSNMHTMVLK 355
           S L+  L R L  + +A+++IA G+ DLT+RL  +  DE   L  +FN FV  +H  + +
Sbjct: 291 SLLIQVLMRPLTTMGRAMQDIAQGEGDLTRRLVVQGKDEFAVLGGSFNQFVERIHASISE 350

Query: 356 LSH-------VSAALAQQSKVTAAQAEERSSRIRLQQDEINMVATAINEMAAATQEIAGN 408
           +S        +S  +   S  +   ++E+S+R        N VA AIN++ AATQEIA N
Sbjct: 351 VSSATRQVHDLSQRVMTSSNASLVGSDEQSART-------NSVAAAINQLGAATQEIARN 403

Query: 409 ADHTAQNAGEAVTACVHGAGQVTQTQRSIQSLAEEVQVATEVIQELEAHGHQISTILSTI 468
           A   +Q+A  A      G   V +T +++  L++++ ++   I+ L A    I  IL  I
Sbjct: 404 AADASQHASGASEQADDGRQVVEKTIQAMTELSQKISLSCTQIETLNASTDNIGHILDVI 463

Query: 469 QNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTKEIQQMIETLQATT 528
           + I++QTNLLALNAAIEAARAGE GRGFAVVADEVR L+ RT  S +EI +MI +LQ  +
Sbjct: 464 KGISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQESAEEIHKMITSLQVGS 523

Query: 529 GKAVGIMDDSRRLADTSVDDANEASVSLEQIHKTVERISDMATQIASAAEEQASVTSEIT 588
            +AV  M+ S+  ++ SV+ AN+A + L  + + +  I  M   +A+A EEQ +V   + 
Sbjct: 524 REAVTTMNASQTSSEESVEVANQAGLRLVSVTQRIGEIDGMNQSVAAATEEQTAVVETLN 583

Query: 589 RNTVGIRDVSNDLAQEAHSAAEQAAELSELSHELEQEIRRFKL 631
            +   I  ++       +   +    LS+ ++ L+Q +  FK+
Sbjct: 584 MDVSHINLLNQQSVANLNETLKDCDALSQQANRLKQLVDSFKI 626