Pairwise Alignments

Query, 631 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 626 a.a., Methyl-accepting chemotaxis protein from Pseudomonas fluorescens FW300-N2E2

 Score =  313 bits (803), Expect = 1e-89
 Identities = 204/634 (32%), Positives = 330/634 (52%), Gaps = 17/634 (2%)

Query: 7   LTLKHKLIGASLSAVVVMATALTWFSASQLQQQTSNAVYTRADAISSTAAKGISDWISIR 66
           +   HK++ A+   V V       F+  + +Q  + +  T    + S  ++ I  W+  R
Sbjct: 1   MKFSHKILLAAALVVAVAFACFILFNDYRQRQSLNASTETSMQELGSLTSRNIQTWVDGR 60

Query: 67  KSISTAFNAHIEAQ-NVVPYLQQARN----AGGFDDIFYGTTDGAMYRSHPERNRA-DYD 120
             +  +    I A  +    L++A         F   ++G TDG M+ S P  NRA DYD
Sbjct: 61  IQLLQSLAQQIAADGSSADSLKRAVGLPAYTSNFQLSYFGGTDGVMF-SVPAGNRAADYD 119

Query: 121 PRTRPWYKDAASAGKQIITTAYSDAITGALLVTIAEPVRLNGNMSGVVGADVLIDQLIAD 180
           PR R WYK A SA + I+T  Y  A +G L++T+A PV+    M GV GAD+ +  + A 
Sbjct: 120 PRARGWYKAANSAQQTIVTEPYIAASSGKLVITVATPVQHQNQMIGVAGADIDLSSVSAI 179

Query: 181 VISMDAGKNAQTMLIDGQNGSFLAHPDKSLLLKPVTTLSSALDMRTIERAANQGELLALK 240
           + S++ G +    ++   +G  L HPD   +LK   TL+ A      + +    E+    
Sbjct: 180 INSLNFGGHGHAFIVSA-DGKILIHPDSKRVLK---TLAEAYPNGAPQISPGVKEV---D 232

Query: 241 LNGVEKFFFFT---AVPDTPWYFAVQMDSDTEYASHSELLTGLITTALLITVIVVVIVSW 297
           L+G  +F  FT    VP   WY A+ +D DT  A  SE  T  +   ++  V ++ ++  
Sbjct: 233 LDGKTQFISFTHVNGVPGADWYVALVLDKDTALAMLSEFRTSALIAMVIAVVFIIALLGM 292

Query: 298 LVSFLFRDLGRVSKALEEIASGDADLTQRLEPRSDDEVGQLASNFNTFVSNMHTMVLKLS 357
           L+  L + L  + +A+ +IA G+ DLT+RL     DE G L ++FN FV  +HT + +++
Sbjct: 293 LIRVLMQPLLTMGRAMHDIAEGEGDLTRRLVIHGHDEFGALGTSFNRFVERIHTSIREVA 352

Query: 358 HVSAALAQQSKVTAAQAEERSSRIRLQQDEINMVATAINEMAAATQEIAGNADHTAQNAG 417
             +  + + +    + +         Q    + VA AIN++ AA QEIA NA   +Q++ 
Sbjct: 353 SATGQVNEVALRVVSASNSSMFNSDQQASRTSSVAAAINQLGAAAQEIAQNAALASQHSS 412

Query: 418 EAVTACVHGAGQVTQTQRSIQSLAEEVQVATEVIQELEAHGHQISTILSTIQNIAEQTNL 477
           +A +    G   V +T  ++Q L+ ++  +   I+ L ++   I  IL  I +I++QTNL
Sbjct: 413 DARSLAEDGQQVVDKTIAAMQQLSAKISDSCGNIETLNSNTVNIGQILEVITSISQQTNL 472

Query: 478 LALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTKEIQQMIETLQATTGKAVGIMDD 537
           LALNAAIEAARAGE GRGFAVVADEVR L+ RT  S +++Q+MIE LQ    +AV  M D
Sbjct: 473 LALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQDSAQQVQKMIEELQVGAREAVLTMTD 532

Query: 538 SRRLADTSVDDANEASVSLEQIHKTVERISDMATQIASAAEEQASVTSEITRNTVGIRDV 597
           S+R +++SV  AN+A   L  + + +  I  M   +A+A EEQ +V   I  +   I  +
Sbjct: 533 SQRQSESSVGIANQAGERLGSVTQRIGEIDGMNQSVATATEEQTAVVESINVDITEINTL 592

Query: 598 SNDLAQEAHSAAEQAAELSELSHELEQEIRRFKL 631
           + +  +   +     A+L + +  L+Q +  F++
Sbjct: 593 NQEGVENLQATLRACADLEQQAARLKQLVGSFRI 626