Pairwise Alignments

Query, 631 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 712 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  268 bits (685), Expect = 6e-76
 Identities = 186/512 (36%), Positives = 282/512 (55%), Gaps = 27/512 (5%)

Query: 142 YSDAITGALLVTIAEPVRLNGNMSGVVGADVLIDQLIADVISMDAGK---NAQTMLIDGQ 198
           Y    T  +L +  EP+ ++G   G+VGAD+ ++  I D++    GK    A  M +   
Sbjct: 206 YRVGSTMTMLASFIEPIMIDGQFQGIVGADLSVN-FIQDMLVAADGKLYDGAGEMALLSS 264

Query: 199 NGSFLAHP-DKSLLLKPVTTLSSALDMRTIERAANQGELLAL----KLNGVEKFFFFTAV 253
           N   +A   D S L +  + L   LD   ++  A  G+        + +G  + +    +
Sbjct: 265 NNRLVAFTKDPSKLGEKASDL---LDASALDNLAKLGDGEVRYDIDEAHGHIEVYMPFGI 321

Query: 254 PDTP--WYFAVQMDSDTEYASHSEL-----------LTGLITTALLITVIVVVIVSWLVS 300
            +T   W   +Q+  +   A    L           + G+    L+I  I ++++ WLV 
Sbjct: 322 GETNARWTLMLQLPLNAVMADLQALQKDLDHQRQADIFGMAIVGLVIAGIGLLVI-WLVG 380

Query: 301 F-LFRDLGRVSKALEEIASGDADLTQRLEPRSDDEVGQLASNFNTFVSNMHTMVLKLSHV 359
             + R L ++   L++IA G+ DLT+RL     DE+G +A  FNTF+S +  M+ ++   
Sbjct: 381 HGIARPLKQMVAMLDDIAQGEGDLTRRLVSDRADELGAIARGFNTFLSKLQGMITQVVTS 440

Query: 360 SAALAQQSKVTAAQAEERSSRIRLQQDEINMVATAINEMAAATQEIAGNADHTAQNAGEA 419
             +++  S+ TA  A   +  +  Q  EI+ VATA++EM A  Q++A NA   AQ A  A
Sbjct: 441 VQSVSDSSEHTADIAIRTNQGVHKQMSEIDQVATAVHEMTATAQDVARNATQAAQAASHA 500

Query: 420 VTACVHGAGQVTQTQRSIQSLAEEVQVATEVIQELEAHGHQISTILSTIQNIAEQTNLLA 479
             A   G   V  T  SI +LA E+  A  V+Q L      I+ IL+ I+ IAEQTNLLA
Sbjct: 501 DQAASQGMQIVRDTSTSIGALAVEIGKAVGVVQTLAKDSENINAILTAIRGIAEQTNLLA 560

Query: 480 LNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTKEIQQMIETLQATTGKAVGIMDDSR 539
           LNAAIEAARAGEQGRGFAVVADEVR L+Q+T  +T+EIQ MI+ LQ  T   V +M+DS+
Sbjct: 561 LNAAIEAARAGEQGRGFAVVADEVRNLAQKTQQATEEIQTMIQQLQQGTRDVVRVMEDSQ 620

Query: 540 RLADTSVDDANEASVSLEQIHKTVERISDMATQIASAAEEQASVTSEITRNTVGIRDVSN 599
              D SV  A +A+ +LE I + V  I+DM TQIASAAEEQ++V  +I RN + I  V+N
Sbjct: 621 TRTDESVQHAAKAAQALETITQAVSVINDMNTQIASAAEEQSAVADDINRNVINIGQVAN 680

Query: 600 DLAQEAHSAAEQAAELSELSHELEQEIRRFKL 631
           ++A  A  ++  +A L++L+ +  + I +F++
Sbjct: 681 EVASGADESSAASAGLTKLAEQQRRLINQFRV 712