Pairwise Alignments

Query, 631 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., Methyl-accepting chemotaxis protein from Pseudomonas fluorescens FW300-N2E2

 Score =  240 bits (612), Expect = 1e-67
 Identities = 149/355 (41%), Positives = 207/355 (58%), Gaps = 8/355 (2%)

Query: 276 LLTGLITTALLITVIVVVIVSWLVSFLFRDLGRVSKALEEIASGDADLTQRLEPRSDDEV 335
           LL GL+   L++ V+ +V++S +   L R        +E+IA G  DL  RLE RS DE+
Sbjct: 197 LLVGLLGCILVLVVLPLVVLSPMRRLLHR--------VEQIAEGGGDLKGRLEVRSADEL 248

Query: 336 GQLASNFNTFVSNMHTMVLKLSHVSAALAQQSKVTAAQAEERSSRIRLQQDEINMVATAI 395
           GQL S FN F+  +  ++ ++  V+  +   ++  A  A      I  +   ++ V+TA 
Sbjct: 249 GQLGSAFNRFLDKLQPLIAEVGRVTGEVDSAARAMADMAATNDRLISSEHAALDQVSTAA 308

Query: 396 NEMAAATQEIAGNADHTAQNAGEAVTACVHGAGQVTQTQRSIQSLAEEVQVATEVIQELE 455
            +M+AA  E+A NA + +  A +A +    GA  V+ T  SI+ LA+EV+ A+  I+ L 
Sbjct: 309 TQMSAAVHEVAHNAANASGAAQQASSQSRDGAEVVSSTIESIRQLAQEVESASGTIEALA 368

Query: 456 AHGHQISTILSTIQNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTK 515
                I  +L  I+ IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR L+ RT  STK
Sbjct: 369 QETSSIGAVLEVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQDSTK 428

Query: 516 EIQQMIETLQATTGKAVGIMDDSRRLADTSVDDANEASVSLEQIHKTVERISDMATQIAS 575
           +IQ  IE LQ+   KAV  M      A  SV+ A      L     ++++I+DMA QIAS
Sbjct: 429 DIQVRIERLQSGVAKAVQAMHVGSTKARDSVERAAGVDQVLSGTGGSIQQINDMAAQIAS 488

Query: 576 AAEEQASVTSEITRNTVGIRDVSNDLAQEAHSAAEQAAELSELSHELEQEIRRFK 630
           A EEQ+SVT EI RN   IRD+SN+ A  +  +   + +LS LS  L +   RF+
Sbjct: 489 ACEEQSSVTEEIARNISDIRDLSNEAAANSAQSMHASQQLSSLSRNLAELTGRFR 543