Pairwise Alignments

Query, 631 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., Chemotactic transducer from Pseudomonas fluorescens FW300-N1B4

 Score =  301 bits (772), Expect = 4e-86
 Identities = 199/635 (31%), Positives = 315/635 (49%), Gaps = 20/635 (3%)

Query: 7   LTLKHKLIGASLSAVVVMATALTWFSASQLQQQTSNAVYTRADAISSTAAKGISDWISIR 66
           L   HK++ A+   V+    + T ++    +    N +      + S  A  I  W++ R
Sbjct: 5   LRFSHKILLAAALIVIAAFASFTLYNDYLQRNAIRNDLDNYLQEMGSVTANNIQTWLAGR 64

Query: 67  K------SISTAFNAHIEAQNVVPYLQQARNAGGFDDIFYGTTDGAMYRSHPERNRADYD 120
                  S + A NA  +  NV   L+Q      F   + G  DG        +    YD
Sbjct: 65  SLLIENLSQNVALNA--DTDNVSKLLEQKAVTSTFMGAYLGNKDGTFIIRPDSKMPDGYD 122

Query: 121 PRTRPWYKDAASAGKQIITTAYSDAITGALLVTIAEPVRLNGNMSGVVGADVLIDQLIAD 180
           PR RPWYK A S G   +T  Y D  +G L+++I   V  +G   GVVG D+ + Q+IAD
Sbjct: 123 PRVRPWYKSAQSTGGSALTEPYIDLASGQLVISIVNSVLKDGQSIGVVGGDLSL-QVIAD 181

Query: 181 VIS-MDAGKNAQTMLIDGQNGSFLAHPDKSLLLKPVTTLSSALDMRTIERAANQGELLAL 239
            ++ +D        LI   +G  L HPDKSL +K   +LS A    T    +   EL  +
Sbjct: 182 SLNALDFDGMGYAFLISA-DGKILVHPDKSLAMK---SLSEAYPKNTPRIGS---ELSEI 234

Query: 240 KLNGVEKFFFFTAVP---DTPWYFAVQMDSDTEYASHSELLTGLITTALLITVIVVVIVS 296
            ++G  +   FT +       WY  + +D D  ++  SE  T  +   ++   I++ ++ 
Sbjct: 235 DVDGKTRIVTFTPIKGLSSVNWYIGLSVDKDKAFSMLSEFRTSAVIATIIAVAIIIALLG 294

Query: 297 WLVSFLFRDLGRVSKALEEIASGDADLTQRLEPRSDDEVGQLASNFNTFVSNMHTMVLKL 356
            L+  L + L  +++A+E+IA G+ DLT+RL  ++ DE G L + FN FV  +HT + ++
Sbjct: 295 MLIRLLIQPLHVMTRAMEDIADGEGDLTKRLTIQNQDEFGILGTAFNRFVERVHTSIREV 354

Query: 357 SHVSAALAQQSKVTAAQAEERSSRIRLQQDEINMVATAINEMAAATQEIAGNADHTAQNA 416
           S  +  + + +    A +         Q    + VA AIN++ AA QEIA NA   +  A
Sbjct: 355 SSATGQVNEVALRVVAASNSSMFNSDQQASRTSSVAAAINQLGAAAQEIARNAAQASSQA 414

Query: 417 GEAVTACVHGAGQVTQTQRSIQSLAEEVQVATEVIQELEAHGHQISTILSTIQNIAEQTN 476
            +A +    G   V ++  ++  L+  +  ++  I+ L +    I  IL  I +I++QTN
Sbjct: 415 SDARSLAEDGQQVVDRSIAAMNQLSTMLSASSTNIESLNSKTVNIGQILEVITSISQQTN 474

Query: 477 LLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTKEIQQMIETLQATTGKAVGIMD 536
           LLALNAAIEAARAGE GRGFAVVADEVR L+ RT  S +++Q MIE LQ    ++V  M 
Sbjct: 475 LLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQESAQQVQTMIEELQVGARESVSTMS 534

Query: 537 DSRRLADTSVDDANEASVSLEQIHKTVERISDMATQIASAAEEQASVTSEITRNTVGIRD 596
           DS+R +  SV+ AN A   L  +   +  I  M   +A+A EEQ +V   I  +   I  
Sbjct: 535 DSQRHSQDSVEIANLAGERLNSVTLRIGEIDGMNQSVATATEEQTAVVESINVDITEINT 594

Query: 597 VSNDLAQEAHSAAEQAAELSELSHELEQEIRRFKL 631
           ++ +  +   S     ++L + +  L+Q +  F++
Sbjct: 595 LNQEGVENLQSTLRACSDLEQQASRLKQLVGSFRI 629