Pairwise Alignments

Query, 631 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 645 a.a., Chemotactic transducer from Pseudomonas fluorescens FW300-N1B4

 Score =  308 bits (789), Expect = 5e-88
 Identities = 211/636 (33%), Positives = 331/636 (52%), Gaps = 19/636 (2%)

Query: 5   MKLTLKHKLIGASLSAVVVMATALTWFSASQLQQQTSNA-VYTRADAISSTAAKGISDWI 63
           M L   HK++ A+ S VVV+A AL       LQ+ T    + +  +      A  + +W+
Sbjct: 20  MNLKFSHKILLAA-SGVVVLAFALFTLYNDYLQRNTIRQNLESSVEQAGELTASSVQNWM 78

Query: 64  SIRKSI--STAFN-AHIEAQNVVPYL-QQARNAGGFDDIFYGTTDGAMYRSHPERNRAD- 118
           S R  +  + A N AH  A   +P L  Q      F   + G  +G ++   P+    D 
Sbjct: 79  SGRVLVLENLAQNIAHQGANADLPGLVDQPALTSNFQFTYVGQANG-VFTQRPDAKMPDG 137

Query: 119 YDPRTRPWYKDAASAGKQIITTAYSDAITGALLVTIAEPVRLNGNMSGVVGADVLIDQLI 178
           YDPR RPWYK A  A K ++T  Y  A+ G L+VTIA PV+  G + GVVG D+ ++ L+
Sbjct: 138 YDPRQRPWYKQAVVADKTMLTPPYMAAV-GGLVVTIAMPVKKQGELLGVVGGDLSLETLV 196

Query: 179 ADVISMDAGKNAQTMLIDGQNGSFLAHPDKSLLLKPVTTLSSALDMRTIERAANQGELLA 238
             + S+D G      L+   +G  +  PDK  ++K +  +     +R  +   NQ     
Sbjct: 197 KIINSVDFGGIGHAFLVSA-DGQVIVSPDKDQVMKNLKDIYPGSSVRIGK--GNQ----E 249

Query: 239 LKLNGVEKFFFFTAV---PDTPWYFAVQMDSDTEYASHSELLTGLITTALLITVIVVVIV 295
           ++LN  ++   FT V   P+  WY  + +D    YA  S+  T  +    +    + V++
Sbjct: 250 VELNKQDRILSFTPVSGLPNAEWYIGLSIDKAKAYAPLSQFRTSALIAMFIAVTAIAVLL 309

Query: 296 SWLVSFLFRDLGRVSKALEEIASGDADLTQRLEPRSDDEVGQLASNFNTFVSNMHTMVLK 355
           S L++ L R L  + +A+++IA G+ DLT+RL   S DE G+L  +FN FV  +H  + +
Sbjct: 310 SLLINVLMRPLTTMGRAMQDIAQGEGDLTRRLVVESKDEFGELGGSFNQFVERIHASICE 369

Query: 356 LSHVSAALAQQSKVTAAQAEERSSRIRLQQDEINMVATAINEMAAATQEIAGNADHTAQN 415
           +S  +  +   S+   A +         Q    N VA AIN++ AATQEIA NA   +Q+
Sbjct: 370 VSSATRQVHDLSQRVMASSNASIVGSDEQSARTNSVAAAINQLGAATQEIARNAADASQH 429

Query: 416 AGEAVTACVHGAGQVTQTQRSIQSLAEEVQVATEVIQELEAHGHQISTILSTIQNIAEQT 475
           A  A      G   V +T  ++  L++++ ++   I+ L A    I  IL  I+ I++QT
Sbjct: 430 ASGASEQADDGRQVVEKTILAMTELSQKISLSCTQIETLNASTDNIGHILDVIKGISQQT 489

Query: 476 NLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTKEIQQMIETLQATTGKAVGIM 535
           NLLALNAAIEAARAGE GRGFAVVADEVR L+ RT  S +EI +MI +LQ  + +AV  M
Sbjct: 490 NLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQESAEEIHKMISSLQIGSREAVTTM 549

Query: 536 DDSRRLADTSVDDANEASVSLEQIHKTVERISDMATQIASAAEEQASVTSEITRNTVGIR 595
           + S+  ++ SV+ AN+A + L  + + +  I  M   +A+A EEQ +V   +  +   I 
Sbjct: 550 NASQASSEQSVEVANQAGLRLVSVTQRIGEIDGMNQSVAAATEEQTAVVETLNVDVNQIN 609

Query: 596 DVSNDLAQEAHSAAEQAAELSELSHELEQEIRRFKL 631
            ++       +   +    LS+ ++ L+Q +  FK+
Sbjct: 610 LLNQQSVANLNETLKDCDALSQQANRLKQLVDSFKI 645