Pairwise Alignments

Query, 631 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  332 bits (851), Expect = 3e-95
 Identities = 215/639 (33%), Positives = 328/639 (51%), Gaps = 28/639 (4%)

Query: 7   LTLKHKLIGASLSAVVVMATALTWFSASQLQQQTSNAVYTRADAISSTAAKGISDWISIR 66
           L   HK++ A+   V+   +  T F+    +    + + +  D +    A  I +W+S R
Sbjct: 5   LKFSHKILLAASLIVIATFSLFTLFNDYLQRNAIRDNLNSYLDEMGDVTAHNIQNWLSGR 64

Query: 67  ----KSISTAFNAHIEAQNVVPYLQQARNAGGFDDIFYGTTDGAMYRSHPERNRADYDPR 122
               +S + +  +      V   L+Q   A  F   + G  DG+      E   ADYDPR
Sbjct: 65  ILLVESAAQSIGSDDAEARVAELLEQKALASTFMFSYLGGQDGSFLMRPAEEMPADYDPR 124

Query: 123 TRPWYKDAASAGKQIITTAYSDAITGALLVTIAEPVRLNGNMSGVVGADVLIDQLIADVI 182
            RPWYKDA +AG   +T  Y DA +G L+++IA P + NG   GVVG D+ +  L+  + 
Sbjct: 125 ARPWYKDAIAAGGSTLTEPYVDAASGELVISIATPAQQNGRNIGVVGGDLGLKVLVEIIN 184

Query: 183 SMDAGKNAQTMLIDGQNGSFLAHPDKSLLLKPVTTLSSALDMRTIERAANQGELLALKLN 242
           ++D        L+ G +G  L HPD S ++K   +L       T    AN  E    +L+
Sbjct: 185 ALDFNGMGHAFLVSG-DGKILVHPDGSKVMK---SLGELFPGHTPSLDANYSEA---ELD 237

Query: 243 GVEKFFFFTAV---PDTPWYFAVQMDSDTEYASHSELLTGLITTALLITVIVVVIVSWLV 299
           G  +   F+ V   P   WY  + +D    YA+ +   T  +  AL    ++++++  L+
Sbjct: 238 GQTRILSFSRVQGLPSVSWYVGISLDKAKAYAALASFRTSAVVAALTAVGVILLLLGMLM 297

Query: 300 SFLFRDLGRVSKALEEIASGDADLTQRLEPRSDDEVGQLASNFNTFVSNMHTMVLKLS-- 357
             L R L  + +A+  IA G+ DLT+RL  +S DE G+LAS FN FV  +HT + ++S  
Sbjct: 298 RVLMRPLTDMGRAMANIAEGEGDLTRRLAVQSKDEFGELASAFNRFVERIHTSIREVSSA 357

Query: 358 -----HVSAALAQQSKVTAAQAEERSSRIRLQQDEINMVATAINEMAAATQEIAGNADHT 412
                 V+A +   S  + A ++E++SR        N VA AINE+ AA QEIA NA   
Sbjct: 358 TQQVNEVAARVLAASNSSMANSDEQASRT-------NSVAAAINELGAAAQEIARNAADA 410

Query: 413 AQNAGEAVTACVHGAGQVTQTQRSIQSLAEEVQVATEVIQELEAHGHQISTILSTIQNIA 472
           +Q A  A      G   V Q   +++ L+ ++  +   I+ L A    I  IL  I+ I+
Sbjct: 411 SQQASGARHQAEDGRQVVEQNIAAMRELSAKISASCAQIEALNAKTVDIGQILEVIKGIS 470

Query: 473 EQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTKEIQQMIETLQATTGKAV 532
           EQTNLLALNAAIEAARAGE GRGFAVVADEVR L+ RT +S +EIQQMIE LQ   G +V
Sbjct: 471 EQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQSSAQEIQQMIEQLQVGAGASV 530

Query: 533 GIMDDSRRLADTSVDDANEASVSLEQIHKTVERISDMATQIASAAEEQASVTSEITRNTV 592
             M +S+R +++SV  A+ A   L ++ + +  I  M   +A+A EEQ +V   +  +  
Sbjct: 531 QTMTESQRQSESSVSIADRAGERLGEVTQRIGEIDGMNQSVATATEEQTAVIESLNMDIT 590

Query: 593 GIRDVSNDLAQEAHSAAEQAAELSELSHELEQEIRRFKL 631
            I  ++    +   S      +L + +  L+Q +  F++
Sbjct: 591 EINTLNQQGVENLQSTLRACGDLDQQARRLKQLVDSFRI 629