Pairwise Alignments

Query, 631 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 542 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  228 bits (581), Expect = 5e-64
 Identities = 134/348 (38%), Positives = 208/348 (59%), Gaps = 3/348 (0%)

Query: 285 LLITVIVVVIVSWLVS-FLFRDLGRVSKALEEIASGDADLTQRLEPRSDDEVGQLASNFN 343
           + + VI  ++++W+ +  L   +G      + IA+ D  L+Q +     DE  +L +   
Sbjct: 197 ITVGVITTLLLAWMYTRSLTGPIGDSLSIAQRIATND--LSQDIPQHGTDEAAKLIAALA 254

Query: 344 TFVSNMHTMVLKLSHVSAALAQQSKVTAAQAEERSSRIRLQQDEINMVATAINEMAAATQ 403
           T  SN+   +  +   S  LA  S+   A  E+ S  I  Q +EI M ATA+NEM+AA +
Sbjct: 255 TMQSNLRNALTLIGDSSTQLAATSEEMHAVTEDASRTILRQTNEIEMAATAVNEMSAAVE 314

Query: 404 EIAGNADHTAQNAGEAVTACVHGAGQVTQTQRSIQSLAEEVQVATEVIQELEAHGHQIST 463
           E+A NA   ++   ++ TA + G  QV +T  +I  +  +VQ+ +  +Q L      IS 
Sbjct: 315 EVASNAASASEVTSQSSTAAMAGRAQVDETVTAINLMVSKVQITSTEVQGLAVMATDISK 374

Query: 464 ILSTIQNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTKEIQQMIET 523
           +L  I+ IAEQTNLLALNAAIEAARAGE GRGFAVVADEVR L+ RT  ST+EI+QM+++
Sbjct: 375 VLDVIRAIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRTQQSTREIEQMVDS 434

Query: 524 LQATTGKAVGIMDDSRRLADTSVDDANEASVSLEQIHKTVERISDMATQIASAAEEQASV 583
           +Q  TG AV  M+ +   A  +++ AN A  +L +I +++ +I++    IA+AAEEQA V
Sbjct: 435 IQTGTGNAVSAMEQTSVQAHKTLEMANGAGKALLEITESISQINERNLMIATAAEEQAQV 494

Query: 584 TSEITRNTVGIRDVSNDLAQEAHSAAEQAAELSELSHELEQEIRRFKL 631
             E+ R+ V IRD+S+  ++ ++  A   AELS L+  L +  ++F++
Sbjct: 495 AREVDRSLVSIRDLSSQTSEGSNQTAIATAELSTLASSLNRLTKQFRV 542