Pairwise Alignments

Query, 631 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 642 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  229 bits (585), Expect = 2e-64
 Identities = 134/355 (37%), Positives = 209/355 (58%), Gaps = 2/355 (0%)

Query: 277 LTGLITTALLITVIVVVIVSWLVSFLFRDLGRVSKALEEIASGDADLTQRLEPRSDDEVG 336
           +T L+T A+++ ++ +     +   + R L     A   IA GD  LT  L     DE+G
Sbjct: 290 VTQLLTVAVIVLLLGIFAAILITRQITRPLDSTVIAARRIADGD--LTNDLSTTRQDELG 347

Query: 337 QLASNFNTFVSNMHTMVLKLSHVSAALAQQSKVTAAQAEERSSRIRLQQDEINMVATAIN 396
            L +       ++ T++  +S+    +A  ++  +A +E+ S+ +  Q+ E++ VATA+N
Sbjct: 348 LLQNTMQHMTVSLRTLIGGISNGVTQIATAAEELSAVSEQTSAGVTQQKLEVDQVATAMN 407

Query: 397 EMAAATQEIAGNADHTAQNAGEAVTACVHGAGQVTQTQRSIQSLAEEVQVATEVIQELEA 456
           +MA+  QE+A N +  +Q A +A     HG+  V    R I  LA EV    E +Q L  
Sbjct: 408 QMASTVQEVAQNTEDASQAARQASDRAAHGSSVVQHATREISQLAGEVGQLGEAMQRLIQ 467

Query: 457 HGHQISTILSTIQNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTKE 516
              +I  ++  I+ +AEQTNLLALNAAIEAARAGEQGRGFAVVADEVR L+QRT +ST E
Sbjct: 468 DSDKIGGVIDVIKAVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQSSTTE 527

Query: 517 IQQMIETLQATTGKAVGIMDDSRRLADTSVDDANEASVSLEQIHKTVERISDMATQIASA 576
           I+ +I++LQ  TG A  +M+ SR+  + +V  A +A  SL +I  ++  I  M+ QI++A
Sbjct: 528 IEALIKSLQDGTGAASELMNASRQRTEGTVALARQAEESLLEITHSIVTIEQMSQQISAA 587

Query: 577 AEEQASVTSEITRNTVGIRDVSNDLAQEAHSAAEQAAELSELSHELEQEIRRFKL 631
           AEEQ++VT EI R+ + +RD+++  A     +A    EL+ L   L+  + RF++
Sbjct: 588 AEEQSAVTDEINRSVISVRDIADQSATATEQSAASTVELARLGSNLQDMVARFRI 642