Pairwise Alignments

Query, 631 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 542 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  232 bits (592), Expect = 3e-65
 Identities = 141/353 (39%), Positives = 201/353 (56%), Gaps = 3/353 (0%)

Query: 280 LITTALLITVIVVVIVSWLVS-FLFRDLGRVSKALEEIASGDADLTQRLEPRSDDEVGQL 338
           ++T  ++I  +V +++  L++  + R L    +  + IASGD  LTQ +     DE G L
Sbjct: 192 MLTAGIVIAFVVAIMLGILITRMITRPLRSAIEVAQRIASGD--LTQSVSSTRGDEAGHL 249

Query: 339 ASNFNTFVSNMHTMVLKLSHVSAALAQQSKVTAAQAEERSSRIRLQQDEINMVATAINEM 398
            +   T   N+   + ++S  S  LA  ++   A  EE +  +  Q DEI   ATA+NEM
Sbjct: 250 LNAIGTMQGNLKRTIQEISSASDQLASAAEELGAVTEESTRGLTRQNDEIQQAATAVNEM 309

Query: 399 AAATQEIAGNADHTAQNAGEAVTACVHGAGQVTQTQRSIQSLAEEVQVATEVIQELEAHG 458
            AA +E+A NA  T++ +    T   +G GQV  T + I ++  E+  +T  +  L  H 
Sbjct: 310 TAAVEEVARNAVSTSEESKSLATDAANGRGQVDNTVKGIGTMVSEITESTGSVTTLAGHV 369

Query: 459 HQISTILSTIQNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTKEIQ 518
             IS +L  I++IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR L+ RT AST EI+
Sbjct: 370 RDISKVLEVIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAHRTQASTVEIE 429

Query: 519 QMIETLQATTGKAVGIMDDSRRLADTSVDDANEASVSLEQIHKTVERISDMATQIASAAE 578
            MI T+Q+    AV  M  S   A  + + A  A  +LE+I   V  I++    IASA+E
Sbjct: 430 GMIGTVQSGADGAVAAMSKSLATATNTQELAQRAGSALEKITSGVGMINERNMVIASASE 489

Query: 579 EQASVTSEITRNTVGIRDVSNDLAQEAHSAAEQAAELSELSHELEQEIRRFKL 631
           EQA V  E+ RN V I+++S   A  A+  +  + ELS L+      + +FKL
Sbjct: 490 EQAQVAREVDRNLVNIQELSAQSAAGANQTSASSQELSRLATSFNTMVAQFKL 542