Pairwise Alignments

Query, 631 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 646 a.a., Histidine kinase, HAMP region:Cache:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  275 bits (704), Expect = 3e-78
 Identities = 188/537 (35%), Positives = 282/537 (52%), Gaps = 10/537 (1%)

Query: 98  IFYGTTDGAMYRSHPERNRADYDPRTRPWYKDA-ASAGKQIITTAYSDAITGALLVTI-- 154
           + YG  +G+   +  +   ++YDPR RPWYK A A+AGK + + AY  A   A+LV+   
Sbjct: 115 VSYGLINGSYIMTPEDPKMSNYDPRVRPWYKTAMANAGKTVRSDAYYWANDDAVLVSTIR 174

Query: 155 AEPVRLNGNMSGVVGADVLIDQLIADVISMDAGKNAQTMLIDGQNGSFLAHPDK-SLLLK 213
           A P +L GN  GVV  DV + QL   V  +  G++   ML++ +NG+ L  P +     K
Sbjct: 175 AIPNKL-GNPGGVVNIDVSLKQLTNIVKQIKLGESGYLMLME-KNGTVLVDPKQPEHNFK 232

Query: 214 PVTTLSSALDMRTIERAANQGELLALKLNGVEKFFFFTAVPDTPWYFAVQMDSDTEYASH 273
            +  L         E A     L+ + LNG        +     W F   +  D   AS 
Sbjct: 233 KLGELGDGFS----ELAKTASGLVEVTLNGERYMANVYSSEQLGWNFIGLIKQDEVMASA 288

Query: 274 SELLTGLITTALLITVIVVVIVSWLVSFLFRDLGRVSKALEEIASGDADLTQRLEPRSDD 333
           + L   +   A ++ V+  ++ +     + R +  VS  LE IA G+ DLTQ L  R  D
Sbjct: 289 TRLTWLIGIIAAVLAVVFAIVGASFARVIVRPIHSVSSGLEGIAGGEGDLTQNLAVRGKD 348

Query: 334 EVGQLASNFNTFVSNMHTMVLKLSHVSAALAQQSKVTAAQAEERSSRIRLQQDEINMVAT 393
           E  QLA  FN F++ + +++  +   +  + + S  +   + + +     Q++ ++MV+T
Sbjct: 349 ETAQLAGWFNKFLTAIRSLIQHIGQAAGKILEASHSSTRVSNDMAEAAGRQREAVDMVST 408

Query: 394 AINEMAAATQEIAGNADHTAQNAGEAVTACVHGAGQVTQTQRSIQSLAEEVQVATEVIQE 453
           A +EM A + E+A +    A +A         G  Q+    RS+  L+EE+  + + + +
Sbjct: 409 AFHEMVATSNEVARSCSQAADSADNGQQQAREGQRQIDDAVRSVDQLSEELTRSAKDMTQ 468

Query: 454 LEAHGHQISTILSTIQNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHAS 513
           LE     I +IL+TI++IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR L++RT  S
Sbjct: 469 LEKDSAGIQSILNTIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAKRTSDS 528

Query: 514 TKEIQQMIETLQATTGKAVGIMDDSRRLADTSVDDANEASVSLEQIHKTVERISDMATQI 573
           T EI  ++  L   T      M  S  ++  SV    +A  S  QI ++V+ I DM TQI
Sbjct: 529 TAEIDSLLGNLAKRTASVAQQMHASLDVSQQSVTKIGQARSSFGQIRESVDVIRDMNTQI 588

Query: 574 ASAAEEQASVTSEITRNTVGIRDVSNDLAQEAHSAAEQAAELSELSHELEQEIRRFK 630
           A+AAEEQ  V  +I R+   I   +  +AQ + SA   +  L  LS EL+  +R+FK
Sbjct: 589 ATAAEEQHQVAEDINRHISQIHGDAQLIAQLSDSARADSRSLEMLSSELDGLVRKFK 645