Pairwise Alignments

Query, 631 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 681 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  231 bits (590), Expect = 6e-65
 Identities = 135/350 (38%), Positives = 207/350 (59%), Gaps = 3/350 (0%)

Query: 285 LLITVIVVVIVSWLVSFLFRDLGRVSKALEEIAS---GDADLTQRLEPRSDDEVGQLASN 341
           LL   +VV++V    +FL      V      IA+    D DLT        DE+G L + 
Sbjct: 332 LLSVALVVLLVGIFAAFLITRQITVPLNSTVIAARRIADGDLTHDSSTTRQDELGLLQNT 391

Query: 342 FNTFVSNMHTMVLKLSHVSAALAQQSKVTAAQAEERSSRIRLQQDEINMVATAINEMAAA 401
                 ++  ++  + +    +A  ++  +A +E+ S+ + LQ++E++ VATA+NEMA+ 
Sbjct: 392 MQHMTVSLRGLIGGIGNGVTQIATAAEQLSAVSEQTSAGVTLQKNEVDQVATAMNEMAST 451

Query: 402 TQEIAGNADHTAQNAGEAVTACVHGAGQVTQTQRSIQSLAEEVQVATEVIQELEAHGHQI 461
            QE+A N +  +Q A +A     HG+  V    R I  LA EVQ   E +Q L     +I
Sbjct: 452 VQEVARNTEDASQAAKQASERAAHGSSVVQHATREIGQLAGEVQQLGEAMQRLTEDSGKI 511

Query: 462 STILSTIQNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTKEIQQMI 521
            +++  I+ +AEQTNLLALNAAIEAARAGEQGRGFAVVADEVR L+QRT  ST EI+ +I
Sbjct: 512 GSVIDVIKAVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQNSTTEIEALI 571

Query: 522 ETLQATTGKAVGIMDDSRRLADTSVDDANEASVSLEQIHKTVERISDMATQIASAAEEQA 581
           + LQ  TG A G+MD S +  + +V  A +A  +L +I++++  I  M+ QI++AAE+Q+
Sbjct: 572 QALQKGTGAASGLMDASLQRTEGTVVLARQAEQALVEINQSIGTIEQMSQQISAAAEQQS 631

Query: 582 SVTSEITRNTVGIRDVSNDLAQEAHSAAEQAAELSELSHELEQEIRRFKL 631
           +VT EI R+ + +RD+++  A     +A    EL+ L  +L+  + RFK+
Sbjct: 632 AVTEEINRSVLSVRDIADQSASATEQSAASTVELARLGSDLQSMVARFKI 681