Pairwise Alignments

Query, 631 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 543 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  248 bits (633), Expect = 5e-70
 Identities = 155/441 (35%), Positives = 239/441 (54%), Gaps = 12/441 (2%)

Query: 195 IDGQNGSFLAHPDKSLLLKPVTTLSSALDMRTIE-RAANQGELLALKLNGVEKFFFFTAV 253
           ++GQ+ S +  PD   +   + TL  A     +  R    G    +K     + F     
Sbjct: 111 LEGQDLSTIKDPDGFAVFNEMVTLVKAQGAGMVNYRWPKPGASEPVKKTSYVQLF----- 165

Query: 254 PDTPWYFAVQMDSDTEYASHSELLTGLITTALLITVIVVVIVSWLVSF---LFRDLGRVS 310
              PW + +      +  + +E  T L    + I  IV+++V  LV+    + R L    
Sbjct: 166 --QPWGWILGSGVYVDDVA-AEFKTQLWNAGMFIAGIVLIMVLLLVTIVRSIVRPLRAAV 222

Query: 311 KALEEIASGDADLTQRLEPRSDDEVGQLASNFNTFVSNMHTMVLKLSHVSAALAQQSKVT 370
            A+  IASG++DLT+ LE   +DE+ +L ++FN FV+ +  +V +L H + AL Q S   
Sbjct: 223 GAMASIASGESDLTRTLETHGNDEITELGTHFNAFVAKLRNVVGQLQHSAVALGQASTDL 282

Query: 371 AAQAEERSSRIRLQQDEINMVATAINEMAAATQEIAGNADHTAQNAGEAVTACVHGAGQV 430
            + AE+  SR   Q  ++++VATA+NE+    Q++A NA+H A    +A +    G   +
Sbjct: 283 GSDAEQAQSRSEQQSQQMDLVATAVNEVTYGVQDVAKNAEHAASEMRDAESQAQQGQINI 342

Query: 431 TQTQRSIQSLAEEVQVATEVIQELEAHGHQISTILSTIQNIAEQTNLLALNAAIEAARAG 490
             + R I+ L+  +  A +V+Q L +   QI ++L  I +IAEQTNLLALNAAIEAARAG
Sbjct: 343 DNSLRQIEHLSSTIGQAVQVMQSLASESTQIGSVLEVISSIAEQTNLLALNAAIEAARAG 402

Query: 491 EQGRGFAVVADEVRVLSQRTHASTKEIQQMIETLQATTGKAVGIMDDSRRLADTSVDDAN 550
           EQGRGFAVVADEVR+L+QRT  ST EIQ MIE LQ  +  AV ++ DS R +  +++ AN
Sbjct: 403 EQGRGFAVVADEVRLLAQRTQKSTAEIQSMIERLQKHSDAAVKVIGDSSRSSQLTIEQAN 462

Query: 551 EASVSLEQIHKTVERISDMATQIASAAEEQASVTSEITRNTVGIRDVSNDLAQEAHSAAE 610
           +A  SL  I + +  ++ +   IASA  +Q  V  +I +N      +S   A  A  +  
Sbjct: 463 QAGQSLTSISQALRNLNSLNASIASATLQQTHVVDDINQNVTQAAQLSQSTALAAEQSTS 522

Query: 611 QAAELSELSHELEQEIRRFKL 631
            +  L  LS EL   +++F++
Sbjct: 523 ASLHLRGLSEELNTLLKQFRV 543