Pairwise Alignments

Query, 631 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  237 bits (605), Expect = 9e-67
 Identities = 144/362 (39%), Positives = 215/362 (59%), Gaps = 5/362 (1%)

Query: 270 YASHSELLTGLITTALLITVIVVVIVSWLVSFLFRDLGRVSKALEEIASGDADLTQRLEP 329
           Y S   ++ GLI    L+T+ +  +++  ++     +G      E IAS  +DLT+ +E 
Sbjct: 183 YDSGLYIVIGLIIFVALLTLCLATLLTKTIT---SPIGSALSVAERIAS--SDLTKEVEV 237

Query: 330 RSDDEVGQLASNFNTFVSNMHTMVLKLSHVSAALAQQSKVTAAQAEERSSRIRLQQDEIN 389
              DE G+L S   T   N+ + +++++  S+ LA  S+   A  E+ S  +  Q DE+N
Sbjct: 238 SGTDEAGRLLSALATMQQNLRSTIMQIADSSSQLAAASEEMTAVTEQSSLGLVSQNDEVN 297

Query: 390 MVATAINEMAAATQEIAGNADHTAQNAGEAVTACVHGAGQVTQTQRSIQSLAEEVQVATE 449
             ATA+ EM+AA  E+A NA+  ++ + +       G  +V+QT +SI+ L+  V+  +E
Sbjct: 298 QAATAVTEMSAAVDEVARNAESASEESRKGQGYTEVGLERVSQTLKSIEKLSSNVRDTSE 357

Query: 450 VIQELEAHGHQISTILSTIQNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQR 509
            I  L      IS ++  I+ IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR L+ R
Sbjct: 358 QITGLSNRAQNISKVVEVIRAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAHR 417

Query: 510 THASTKEIQQMIETLQATTGKAVGIMDDSRRLADTSVDDANEASVSLEQIHKTVERISDM 569
           T  ST+EI+QMI+ +Q  + +AV  M  SR LA  S+  A +AS SL+QI   +  I++ 
Sbjct: 418 TQVSTQEIEQMIQAIQNDSDQAVKAMATSRELAAESLSVAGDASSSLDQIATAITGINER 477

Query: 570 ATQIASAAEEQASVTSEITRNTVGIRDVSNDLAQEAHSAAEQAAELSELSHELEQEIRRF 629
              IA+A+EEQA V  E+ RN V IR++++  +  A   A    E+S+L+  L Q + RF
Sbjct: 478 NILIATASEEQAHVAREVDRNLVSIRELASQSSAGASQTASACNEMSKLAVSLNQLVNRF 537

Query: 630 KL 631
           K+
Sbjct: 538 KV 539