Pairwise Alignments

Query, 631 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 636 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  279 bits (714), Expect = 2e-79
 Identities = 202/643 (31%), Positives = 320/643 (49%), Gaps = 30/643 (4%)

Query: 7   LTLKHKLIGASLSAVVVMATALTWFSASQLQQQTSNAVYTRADAISSTAAKGISDWISIR 66
           LT+K K++       V +A  L+  +   L Q ++  V  +    S   AK +S    + 
Sbjct: 6   LTIKQKIL-----LTVSLAVILSTVAVGLLGQHSARDVVEQRMLGSEMPAKMLSIRNELE 60

Query: 67  KSISTAFNAH---IEAQNVVPYLQQARNAGGFDDIFYGTTDGAMYRSHPERNRADYD--- 120
           K + +  NA     +++ +  +L+Q R A     +     D A      + + AD +   
Sbjct: 61  KDMVSLLNAAKQLADSRMLGKWLEQGRPAEDESRVVSQLQDVASQYQLAQASYADRETGA 120

Query: 121 ------------PRTRPWYKDAASAGKQIITTAYSDAITGALLVTIAEPVRLNGNMSGVV 168
                       P    W+ D  S+G Q     +++A     L    +  +LNG   G+ 
Sbjct: 121 YYTQSGFLRILTPEQDGWFFDYRSSGVQQRLNVFTEANGDVKLFINYQ--QLNGR--GLA 176

Query: 169 GADVLIDQLIADVISMDAGKNAQTMLIDGQNGSFLAHPDKSLLLKPVTTLSSALDMRTIE 228
           G    +D ++  + S    ++    L+D + G    H D   + K   TL+S        
Sbjct: 177 GLAKSLDAMVQRLTSFKLEESGFVYLVDAK-GEVQLHSDPGKIRK--ATLNSLYGKSGSL 233

Query: 229 RAANQGELLALKLNGVEKFFFFTAVPDTPWYFAVQMDSDTEYASHSELLTGLITTALLIT 288
            +      + ++++G       + +P   WY   Q+     +A   E    ++ + LLI 
Sbjct: 234 LSRADFNYMEVEVDGQPMMVASSYLPSIDWYLVAQVPEAEVFALLDEAALKILFSTLLIA 293

Query: 289 VIVVVIVSWLVSFLFRDLGRVSKALEEIASGDADLTQRLEPRSDDEVGQLASNFNTFVSN 348
           +  VV+  ++ S + + +  V++   +I  G+ DL QRL  + +DE+ QLAS FN+F+S 
Sbjct: 294 LAFVVLSGFVASSVSKPIAAVARMFRDIGEGEGDLRQRLPVQGEDELAQLASGFNSFISK 353

Query: 349 MHTMVLKLSHVSAALAQQSKVTAAQAEERSSRIRLQQDEINMVATAINEMAAATQEIAGN 408
           +   V++++  S  L + +   + QA++     + Q+D    V TAINEM A   EIA N
Sbjct: 354 IQDSVIEVAQTSEQLGKSAIDVSRQAQQTLEDSQDQKDRTMQVVTAINEMGATVNEIAAN 413

Query: 409 ADHTAQNAGEAVTACVHGAGQVTQTQRSIQSLAEEVQVATEVIQELEAHGHQISTILSTI 468
           A   A+ A +A  A   G   VTQ + +I  L+++V    EVI+ L  H   I +IL  I
Sbjct: 414 AAQAAEAAKDADRASGSGQKVVTQARDTINQLSKDVSQVGEVIESLATHTKSIGSILDVI 473

Query: 469 QNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTKEIQQMIETLQATT 528
           + I+EQTNLLALNAAIEAARAGE GRGFAVVADEVR L+ RT AST E+Q MI+ LQ+ +
Sbjct: 474 RAISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLASRTAASTDEVQVMIDKLQSES 533

Query: 529 GKAVGIMDDSRRLADTSVDDANEASVSLEQIHKTVERISDMATQIASAAEEQASVTSEIT 588
            +AV  M  SR  +   V   +EAS +L  I   +  ISDM  Q+A+A EEQ++V  +I 
Sbjct: 534 ARAVNAMSQSRSRSQEGVSAVDEASNTLSGISDQIGLISDMNIQVAAATEEQSTVVEDIN 593

Query: 589 RNTVGIRDVSNDLAQEAHSAAEQAAELSELSHELEQEIRRFKL 631
           RN   I D++   A  A +AA  + +L+ L+  L+Q + RFK+
Sbjct: 594 RNVTEINDITQRTAATAQAAARASKDLNALATRLDQLVARFKV 636