Pairwise Alignments

Query, 631 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 706 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  227 bits (579), Expect = 1e-63
 Identities = 165/576 (28%), Positives = 268/576 (46%), Gaps = 39/576 (6%)

Query: 86  LQQARNAGGFDDIFYGTTDGAMYRSHPERNRADYDP-------RTRPWYKDAASAGKQII 138
           +      G  +  FY   DG+  +S  +     Y         R   WY  A    K  +
Sbjct: 138 MHSVEGVGTLEVYFYRNDDGSQTQSQVDDANEKYADTLNEFGLREAEWYLCAKDTQKPCL 197

Query: 139 TTAYSDAIT---GALLVTIAEPVRLNGNMSGVVGADV-------LIDQLIADVISMDAGK 188
              Y   IT     L+ ++  P+   G   GVVG D+       +I++L A   S+  G+
Sbjct: 198 MEPYLYEITPGNNMLMTSLTVPIVRGGRFRGVVGVDLNLPVFQKMIEELSA---SLYQGQ 254

Query: 189 NAQTMLIDGQNGSFLAHPDKSLLLKPVTTLSSALDMRTIERAANQGELLALKLNGVEKFF 248
              T+L         +H DK         L  A+D     +    G+     LN      
Sbjct: 255 AKVTLLSTKGLIVAASHYDKK-----ARPLGEAIDKSLANQILGLGKGDGYLLNDSSMIV 309

Query: 249 FFTA---VPDTPWYFAVQMDSDTEYASHSELLTGLITTA-----------LLITVIVVVI 294
            +     +  + W  A+++      AS  ++   +   A           + I  + V++
Sbjct: 310 AYPINIPLSGSQWLLAIEVPRQIALASAEQVEGSMQAMAASLGRFVLLLGIGIAAVAVIL 369

Query: 295 VSWLVSFLFRDLGRVSKALEEIASGDADLTQRLEPRSDDEVGQLASNFNTFVSNMHTMVL 354
           ++  +  +   + ++ + + ++AS + DLTQ L+     E+  L + FN F+  +H ++ 
Sbjct: 370 IALFIRSVVAPIQQIQQRVSQLASAEGDLTQSLKVDEHAELIALGNGFNAFIGKLHGLIS 429

Query: 355 KLSHVSAALAQQSKVTAAQAEERSSRIRLQQDEINMVATAINEMAAATQEIAGNADHTAQ 414
           +L  V+     +S+ TA  AEE    +  Q  EI  V TA+NEM+    E+A  ++ TA 
Sbjct: 430 ELKKVATESRNESQATARIAEETKQSVNRQYSEIESVVTAVNEMSHTAHEVAKASEQTAS 489

Query: 415 NAGEAVTACVHGAGQVTQTQRSIQSLAEEVQVATEVIQELEAHGHQISTILSTIQNIAEQ 474
            +    +        +TQ    + ++++E   A   + ++      IS IL  I  IA Q
Sbjct: 490 ESAAMASQVKVSQDSLTQAVSLVSTMSKESLQAKIAVGKVAESSTNISKILEVISAIAAQ 549

Query: 475 TNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTKEIQQMIETLQATTGKAVGI 534
           TNLLALNAAIEAARAGEQGRGFAVVADEVR L+ +T AST +I ++I+ L+     A GI
Sbjct: 550 TNLLALNAAIEAARAGEQGRGFAVVADEVRSLASKTQASTDDISRLIDALEQEVKGASGI 609

Query: 535 MDDSRRLADTSVDDANEASVSLEQIHKTVERISDMATQIASAAEEQASVTSEITRNTVGI 594
           +D    LA+ +V    +A  +L  +   +  IS+  TQIA+AAEEQ++VT E++RN  GI
Sbjct: 610 IDKGVGLAEQAVAQTEQAFEALSVMVAGINEISNQVTQIATAAEEQSAVTEEVSRNITGI 669

Query: 595 RDVSNDLAQEAHSAAEQAAELSELSHELEQEIRRFK 630
            D + +L   A  A E +  L++L    E ++ + +
Sbjct: 670 SDSAAELMDLAGKARESSESLAKLVGRQESQLAKLR 705