Pairwise Alignments

Query, 631 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 620 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  238 bits (607), Expect = 6e-67
 Identities = 144/371 (38%), Positives = 216/371 (58%), Gaps = 3/371 (0%)

Query: 261 AVQMDSDTEYASHSELLTGLITTALLITVIVVVIVSWLVSFLFRDLGRVSKALEEIASGD 320
           A  MD+ ++  + S  +T  I   +LIT++++     ++  +   + R+S A+  I +  
Sbjct: 253 AQSMDAISD--AESATVTISIVVFILITLVLIGFTLAIIRSIMEPVQRISDAISRIEA-T 309

Query: 321 ADLTQRLEPRSDDEVGQLASNFNTFVSNMHTMVLKLSHVSAALAQQSKVTAAQAEERSSR 380
            DLT R + + DDE+GQ+A +FN+ V +  +++ ++      +    +  +  +   S  
Sbjct: 310 KDLTLRCDTKVDDEIGQIARHFNSMVESFQSLIREVLTSVEVVNHSCQELSENSMRASEG 369

Query: 381 IRLQQDEINMVATAINEMAAATQEIAGNADHTAQNAGEAVTACVHGAGQVTQTQRSIQSL 440
           +  Q +E +MVATAI EM A   EIA N +  A+ AG        G   V  T   IQ+L
Sbjct: 370 VGRQLNETDMVATAITEMGATIDEIASNTELAAERAGNTHDNAQQGQVGVEHTIEKIQAL 429

Query: 441 AEEVQVATEVIQELEAHGHQISTILSTIQNIAEQTNLLALNAAIEAARAGEQGRGFAVVA 500
           A ++  + +V+ ELE     I ++L  I+ IAEQTNLLALNAAIEAARAGEQGRGFAVVA
Sbjct: 430 AAQLTDSAQVVSELEKDSETIGSVLDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVA 489

Query: 501 DEVRVLSQRTHASTKEIQQMIETLQATTGKAVGIMDDSRRLADTSVDDANEASVSLEQIH 560
           DEVR L+ RT  ST+EI  +I+TLQ+ T   V +M+ ++R    S D A  A   LEQI+
Sbjct: 490 DEVRSLAMRTQESTEEIAGIIQTLQSRTRSIVQLMEATQRQGIESADQAASAGALLEQIN 549

Query: 561 KTVERISDMATQIASAAEEQASVTSEITRNTVGIRDVSNDLAQEAHSAAEQAAELSELSH 620
             V  I DM+TQIA+A EEQ+ V SE+ +N V IRD++ + AQ A   A+ + ++   + 
Sbjct: 550 ADVTNIMDMSTQIAAAIEEQSMVASEVNKNVVVIRDIAAESAQAADENAKASDDVKARTQ 609

Query: 621 ELEQEIRRFKL 631
            L Q +  FK+
Sbjct: 610 VLYQAVSLFKI 620