Pairwise Alignments

Query, 631 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  224 bits (572), Expect = 6e-63
 Identities = 141/400 (35%), Positives = 218/400 (54%), Gaps = 13/400 (3%)

Query: 244 VEKFFFFTAVPDTPWYF---AVQMDSDTEYASHSELLTG--------LITTALLITVIVV 292
           V K  +   VP   W     A   D D +  S+ E++T         ++  AL++  I  
Sbjct: 156 VPKIGYAATVPGKDWILGTGAYTDDIDAQVESYREVMTKHMNDKAMMILLFALVLVAITA 215

Query: 293 VIVSWLVSFLFRDLGRVSKALEEIASGDADLTQRLEPRSDDEVGQLASNFNTFVSNMHTM 352
           V++      +   +  + + LE+IA G+ DLT+RL+ +  DE+  L   FN FV  +  +
Sbjct: 216 VVMLVAAQRMVNPIHNMVQNLEDIAKGEGDLTKRLDVQGSDEIAMLGRAFNQFVDKLQGI 275

Query: 353 VLKLSHVSAALAQQSKVTAAQAEERSSRIRLQQDEINMVATAINEMAAATQEIAGNADHT 412
           +  ++  +  +   +   ++Q    + ++    +E + V TAI EM+A   E+A +    
Sbjct: 276 IKDVARATVEVKSGADNISSQTAAMAQQLISHNNETDQVVTAITEMSATASEVAMSTTQV 335

Query: 413 AQNAGEAVTACVHGAGQ-VTQTQRSIQSLAEEVQVATEVIQELEAHGHQISTILSTIQNI 471
           A+ A +A T  V  A + V  +   + +L  E+ +A   I  L     +I+++LS I  I
Sbjct: 336 AE-ATQAATQDVGNAQECVDSSLHEVSTLMAEIDMAAGHINSLNEQSQKINSVLSVIGGI 394

Query: 472 AEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTKEIQQMIETLQATTGKA 531
           AEQTNLLALNAAIEAARAGEQGRGFAVVADEVR L+ RT AST EI +M+  L      A
Sbjct: 395 AEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQASTLEINEMLSELHNLVSLA 454

Query: 532 VGIMDDSRRLADTSVDDANEASVSLEQIHKTVERISDMATQIASAAEEQASVTSEITRNT 591
           V  M+ S++    SV  +   S SL  +   V  I+DM+TQIA+AA EQ+SVT EI RN 
Sbjct: 455 VSSMESSQQSCHRSVTSSRAISDSLGAVTSAVTSINDMSTQIATAATEQSSVTEEINRNV 514

Query: 592 VGIRDVSNDLAQEAHSAAEQAAELSELSHELEQEIRRFKL 631
             I+++ N+L Q ++SA++ +  L+     L+  + +FK+
Sbjct: 515 FAIQEIVNELLQASNSASDTSQGLANEGRNLDTLVGQFKV 554