Pairwise Alignments

Query, 631 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 634 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  254 bits (650), Expect = 6e-72
 Identities = 152/370 (41%), Positives = 212/370 (57%)

Query: 262 VQMDSDTEYASHSELLTGLITTALLITVIVVVIVSWLVSFLFRDLGRVSKALEEIASGDA 321
           + +D      + S++   LI    +  +I   I  ++   + R +   + AL +IA G+ 
Sbjct: 265 IALDRSHSEQAMSDIRFKLIMIGFIAFLIGTAIAWFIAKSITRPIAETTNALNDIAEGEG 324

Query: 322 DLTQRLEPRSDDEVGQLASNFNTFVSNMHTMVLKLSHVSAALAQQSKVTAAQAEERSSRI 381
           DLT+R+E +S DE+ QLA  FN F   +H  V ++S  ++ LA  ++  +A   E     
Sbjct: 325 DLTRRIEVKSKDEIAQLALAFNRFAEKIHATVAQVSDSTSLLATSAEEMSAITNETQQMA 384

Query: 382 RLQQDEINMVATAINEMAAATQEIAGNADHTAQNAGEAVTACVHGAGQVTQTQRSIQSLA 441
           + Q  E   VATA+NEMAA  QE+A NA   A  A  A  +  HG   V +   +I  LA
Sbjct: 385 KRQHLETEQVATAMNEMAATVQEVAHNATDAADAATHASESTEHGKLLVEKVISTISLLA 444

Query: 442 EEVQVATEVIQELEAHGHQISTILSTIQNIAEQTNLLALNAAIEAARAGEQGRGFAVVAD 501
           +E+  A + I ELE +  QI ++L  I+NIA+QTNLLALNAAIEAARAGEQGRGFAVVAD
Sbjct: 445 DEIAHAAKAINELERNTAQIDSVLVVIRNIADQTNLLALNAAIEAARAGEQGRGFAVVAD 504

Query: 502 EVRVLSQRTHASTKEIQQMIETLQATTGKAVGIMDDSRRLADTSVDDANEASVSLEQIHK 561
           EVR L+ RT AST EIQQMIE LQ +    V  M+ S       V   +EA  +LE I +
Sbjct: 505 EVRTLASRTQASTSEIQQMIEALQHSAKSTVSTMNTSTATTQNCVSLVHEAGEALEAITQ 564

Query: 562 TVERISDMATQIASAAEEQASVTSEITRNTVGIRDVSNDLAQEAHSAAEQAAELSELSHE 621
            V  IS M  QIASAA EQ +V++EI +N   I D++ +  + A   A    EL++LS  
Sbjct: 565 AVSTISQMNIQIASAANEQCAVSAEINKNVNNINDITINATESAVQTARAGDELAQLSMR 624

Query: 622 LEQEIRRFKL 631
           L   + +F++
Sbjct: 625 LTTLLAQFRI 634