Pairwise Alignments

Query, 631 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 634 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  256 bits (653), Expect = 3e-72
 Identities = 156/365 (42%), Positives = 216/365 (59%), Gaps = 5/365 (1%)

Query: 272 SHSE-LLTGLITTALLITVIVVVI---VSWLVS-FLFRDLGRVSKALEEIASGDADLTQR 326
           SHSE  ++ +    ++I VI ++I   ++W ++  + R +   + AL +IA G+ DLT+R
Sbjct: 270 SHSEQAMSDIRLKLIMIGVIALLIGTAIAWFIAKSITRPIAETTDALNDIAEGEGDLTRR 329

Query: 327 LEPRSDDEVGQLASNFNTFVSNMHTMVLKLSHVSAALAQQSKVTAAQAEERSSRIRLQQD 386
           +E +S DE+ QLA  FN F   +H  V ++S  ++ LA  ++  +A   E       Q  
Sbjct: 330 IEVKSKDEMAQLAQAFNRFAEKIHATVAQVSDSTSLLATSAEEMSAITHETQQMANRQHL 389

Query: 387 EINMVATAINEMAAATQEIAGNADHTAQNAGEAVTACVHGAGQVTQTQRSIQSLAEEVQV 446
           E   VATA+NEMAA  QE+A NA   A  A  A  +   G   V +   +I  LA+E+  
Sbjct: 390 ETEQVATAMNEMAATVQEVAHNATDAADAATHASESTEQGKLLVEKVISTISLLADEIAQ 449

Query: 447 ATEVIQELEAHGHQISTILSTIQNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVL 506
           A   I ELE +  QI ++L  I+NIA+QTNLLALNAAIEAARAGEQGRGFAVVADEVR L
Sbjct: 450 AANAINELERNTTQIDSVLVVIRNIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRTL 509

Query: 507 SQRTHASTKEIQQMIETLQATTGKAVGIMDDSRRLADTSVDDANEASVSLEQIHKTVERI 566
           + RT AST EIQQMIETLQ +    V  M+ S     + V   +EA  +LE I + V  I
Sbjct: 510 ASRTQASTTEIQQMIETLQQSAKATVSSMNTSTATTQSCVSLVHEAGSALEAITQAVSTI 569

Query: 567 SDMATQIASAAEEQASVTSEITRNTVGIRDVSNDLAQEAHSAAEQAAELSELSHELEQEI 626
           S M  QIASAA EQ +V++EI +N   I D++ +  + A   A    EL++LS  L   +
Sbjct: 570 SQMNIQIASAANEQCAVSAEINKNVNNINDIATNATESAMQTARAGDELAQLSMRLTTLL 629

Query: 627 RRFKL 631
            +FK+
Sbjct: 630 SQFKI 634