Pairwise Alignments

Query, 631 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  230 bits (587), Expect = 1e-64
 Identities = 140/399 (35%), Positives = 211/399 (52%), Gaps = 11/399 (2%)

Query: 244 VEKFFFFTAVPDTPWYFAVQM---DSDTEYASHSELLT--------GLITTALLITVIVV 292
           +EK  +   +P T W         D D     +   +T         ++  ALL+  I  
Sbjct: 156 IEKIGYSMMIPGTDWMLGTGAYIDDIDAVVEDYRTTVTEQMIDKSYAILLIALLLAAITA 215

Query: 293 VIVSWLVSFLFRDLGRVSKALEEIASGDADLTQRLEPRSDDEVGQLASNFNTFVSNMHTM 352
            ++      +   +  ++  L +IA G+ DLT+RL  + DDE+ QL  +FN FV  + T+
Sbjct: 216 PVILVTAQRMVTPIKNMADNLNDIAKGEGDLTKRLAVKGDDEIAQLGRSFNLFVDKLQTI 275

Query: 353 VLKLSHVSAALAQQSKVTAAQAEERSSRIRLQQDEINMVATAINEMAAATQEIAGNADHT 412
           +  ++H +A +   +     Q +  S ++    +E + V TAI EM+A   E+A N    
Sbjct: 276 IGDVAHATAKVKTAANAIHDQTKVMSRQLISHNNETDQVVTAITEMSATASEVAQNTTQV 335

Query: 413 AQNAGEAVTACVHGAGQVTQTQRSIQSLAEEVQVATEVIQELEAHGHQISTILSTIQNIA 472
           A+    A     +    V  +   I +L  ++  A   IQ L     +I+++LS I  IA
Sbjct: 336 AEATHAATGDVANAQRCVDASLEEISALMAQINNAASNIQSLSEQSQKINSVLSVIGGIA 395

Query: 473 EQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTKEIQQMIETLQATTGKAV 532
           EQTNLLALNAAIEAARAGEQGRGFAVVADEVR L+ RT +ST EI +M+  L      AV
Sbjct: 396 EQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLASRTQSSTLEINEMLSELHKLVSLAV 455

Query: 533 GIMDDSRRLADTSVDDANEASVSLEQIHKTVERISDMATQIASAAEEQASVTSEITRNTV 592
             M++S++    SVD +   S SL  +   V  I+DM+TQIA+AA EQ+SVT EI RN  
Sbjct: 456 KTMEESQQSCIRSVDSSRAISESLGSVTSAVTAINDMSTQIATAATEQSSVTEEINRNVF 515

Query: 593 GIRDVSNDLAQEAHSAAEQAAELSELSHELEQEIRRFKL 631
            I+++ N+L   +  AA  +  +S+    L + + +FK+
Sbjct: 516 AIQEIVNELLHSSEEAASVSQTVSQEGLNLGKLVGQFKI 554