Pairwise Alignments

Query, 631 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  230 bits (586), Expect = 1e-64
 Identities = 140/400 (35%), Positives = 221/400 (55%), Gaps = 13/400 (3%)

Query: 244 VEKFFFFTAVPDTPWYFAVQM---DSDTEYASHSELLTGLITTALLITVIVVVIVSWLVS 300
           +EK  +   VP T W         D +     + + +T  +     + +++ ++++ + +
Sbjct: 156 IEKISYVMMVPGTDWMLGTGAYIDDIEAVVEDYRQTVTEQMADKSFMILLIALVLTGITA 215

Query: 301 FLFR--------DLGRVSKALEEIASGDADLTQRLEPRSDDEVGQLASNFNTFVSNMHTM 352
           F+           +  ++ +L +IA G+ DLT+RL  + +DE+ QL   FN FV  + T+
Sbjct: 216 FIIMVAAHRMVVPIKNMADSLNDIAKGEGDLTKRLSVKGEDEIAQLGQAFNLFVDKLQTI 275

Query: 353 VLKLSHVSAALAQQSKVTAAQAEERSSRIRLQQDEINMVATAINEMAAATQEIAGNADHT 412
           +  +++ +A +   +     Q +  SS++    +E + V TAI EM++   E+A N    
Sbjct: 276 IGDVANATAKVKSAANAIHDQTKVMSSQLLSHNNETDQVVTAITEMSSTASEVAQNTTQV 335

Query: 413 AQNAGEAVTACVHGAGQ-VTQTQRSIQSLAEEVQVATEVIQELEAHGHQISTILSTIQNI 471
           A+ A +A T  V  A + V  +   I  L  ++  A   I+ L     +I+++LS I  I
Sbjct: 336 AE-ATQAATGDVANAQRCVDASLEEIAGLMSQINNAAGSIKSLSEQSQKINSVLSVIGGI 394

Query: 472 AEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTKEIQQMIETLQATTGKA 531
           AEQTNLLALNAAIEAARAGEQGRGFAVVADEVR L+ RT AST EI +M+  L      A
Sbjct: 395 AEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLASRTQASTLEINEMLSELHKLVSVA 454

Query: 532 VGIMDDSRRLADTSVDDANEASVSLEQIHKTVERISDMATQIASAAEEQASVTSEITRNT 591
           V  MD+S++    SVD +   S SL  +   V  I+DM+TQIA+AA EQ+SVT EI RN 
Sbjct: 455 VKTMDESQQSCVRSVDSSRAISESLGSVTSAVTAINDMSTQIATAATEQSSVTEEINRNV 514

Query: 592 VGIRDVSNDLAQEAHSAAEQAAELSELSHELEQEIRRFKL 631
             I+++ N+L   +  AA+ +  +S+    L + + +FK+
Sbjct: 515 YAIQEIVNELLHSSEDAAKVSQTVSQEGINLGKLVGQFKI 554