Pairwise Alignments

Query, 631 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 673 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  228 bits (581), Expect = 7e-64
 Identities = 135/348 (38%), Positives = 215/348 (61%), Gaps = 3/348 (0%)

Query: 285 LLITVIVVVIVSW-LVSFLFRDLGRVSKALEEIASGDADLTQRLEPRSDDEVGQLASNFN 343
           +LI ++  VI+S+ +V+ L R L +V+ AL  +ASG+  LT +L+    DE  +LA N N
Sbjct: 328 VLIAIVAAVIISFAVVAPLKRSLYQVNNALNVLASGN--LTHKLDDSGHDEFAELAKNCN 385

Query: 344 TFVSNMHTMVLKLSHVSAALAQQSKVTAAQAEERSSRIRLQQDEINMVATAINEMAAATQ 403
             V ++  +++ +   S  LA  ++ T+A   + +S I+ Q+ +++ VATA  E++++ Q
Sbjct: 386 RLVDSLRGLIVGILDRSNQLAAAAEQTSAITAQTTSGIQEQKSQVDQVATATTELSSSAQ 445

Query: 404 EIAGNADHTAQNAGEAVTACVHGAGQVTQTQRSIQSLAEEVQVATEVIQELEAHGHQIST 463
           +++ +AD       +A     H      + +R+I +LA+EV  A +VI ++++    I +
Sbjct: 446 QVSMSADDALAQIKQADQEAKHMRTIAEENKRTILALADEVAKAGQVINKVQSDSASIGS 505

Query: 464 ILSTIQNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTKEIQQMIET 523
           IL  I+ IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR L+ RT  ST+EIQQMIE 
Sbjct: 506 ILDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQVSTREIQQMIEV 565

Query: 524 LQATTGKAVGIMDDSRRLADTSVDDANEASVSLEQIHKTVERISDMATQIASAAEEQASV 583
           LQ    +AV  MD  R  A+  VD   +A+++LE I ++V +  D  T IA AA+EQ  V
Sbjct: 566 LQQGAQQAVAAMDMGRAQANACVDKTEQANLALETISQSVHKAYDAGTHIAHAAQEQNVV 625

Query: 584 TSEITRNTVGIRDVSNDLAQEAHSAAEQAAELSELSHELEQEIRRFKL 631
           + +++     I  +S + A  A   A+ + ++++L+ EL+  +  F++
Sbjct: 626 SQQVSEKLEHIAAISEETAIGADQTAQSSHQVAKLAEELQASVGEFRV 673