Pairwise Alignments

Query, 631 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 495 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  223 bits (569), Expect = 1e-62
 Identities = 133/364 (36%), Positives = 206/364 (56%), Gaps = 5/364 (1%)

Query: 271 ASHSELLTGLITTALLI---TVIVVVIVSWLVSFLFRDLGRVSKALEEIASGDADLTQRL 327
           A  S+LL G    ALLI   +++V+ I+  L   +   L +V  ALEEIA+GD DL+ RL
Sbjct: 134 AQLSDLLLGYFLQALLILAGSLLVIFII--LKRLVISPLDKVVAALEEIANGDGDLSHRL 191

Query: 328 EPRSDDEVGQLASNFNTFVSNMHTMVLKLSHVSAALAQQSKVTAAQAEERSSRIRLQQDE 387
              S+DE+G+LA+ FN FV  +H  + ++   S  L   +K     ++  + R++ Q  E
Sbjct: 192 PVESEDEIGKLANAFNGFVEQIHGTITRVHETSGLLLGDAKALGTLSQSNNQRVQAQLKE 251

Query: 388 INMVATAINEMAAATQEIAGNADHTAQNAGEAVTACVHGAGQVTQTQRSIQSLAEEVQVA 447
                TA+ +++A+  E+A NA  TA  A +A  A   G  Q        + LA E+  +
Sbjct: 252 TEAAVTAVTQLSASANEVAINAKRTADAATQADRAVDDGQRQFDSGLAITRQLAGELARS 311

Query: 448 TEVIQELEAHGHQISTILSTIQNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLS 507
            + + +L+    +I  ++  I +IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR L+
Sbjct: 312 AQSVSQLQQETQRIDEVVVVISSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLA 371

Query: 508 QRTHASTKEIQQMIETLQATTGKAVGIMDDSRRLADTSVDDANEASVSLEQIHKTVERIS 567
            RT  +T EIQ+MI+ +Q+   + V +M  S+ L++  V+ + E  + L ++   V  IS
Sbjct: 372 SRTQQATGEIQKMIQQVQSRVAETVNVMQSSQTLSNQGVNRSEEIKLVLSKVTDLVSNIS 431

Query: 568 DMATQIASAAEEQASVTSEITRNTVGIRDVSNDLAQEAHSAAEQAAELSELSHELEQEIR 627
           +M  +++ AA+EQ  VT  I+R    + +VS   + ++   A+ +  L      L   + 
Sbjct: 432 NMNIEVSHAAQEQTCVTEAISRTLNDLANVSGSASLDSEHLAQSSERLFHQGERLRTLVT 491

Query: 628 RFKL 631
            F+L
Sbjct: 492 SFRL 495