Pairwise Alignments

Query, 631 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 533 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  240 bits (613), Expect = 1e-67
 Identities = 144/360 (40%), Positives = 223/360 (61%), Gaps = 6/360 (1%)

Query: 273 HSELLTGLITTALLITVIVVVIVSWLVS-FLFRDLGRVSKALEEIASGDADLTQRLEPRS 331
           H  +L G  T   LI ++++  + +++S  + + L +V+ A++ IA+G+  LT +L    
Sbjct: 179 HEYVLMGGTT---LILILLMAALGYIISRSIVQPLDQVNNAMQIIATGN--LTPQLAVTG 233

Query: 332 DDEVGQLASNFNTFVSNMHTMVLKLSHVSAALAQQSKVTAAQAEERSSRIRLQQDEINMV 391
            DE+  LA N N  ++++ T + + +H +  ++Q +   A+ AEE +  +  Q+D++  +
Sbjct: 234 KDELAALAHNINQSMASIRTALAEANHSADNVSQAASRIASTAEETNQAVNNQRDQLAQL 293

Query: 392 ATAINEMAAATQEIAGNADHTAQNAGEAVTACVHGAGQVTQTQRSIQSLAEEVQVATEVI 451
           ATA+NEM+A   ++A NA+ TA++  EA      G   V  +   I +LA+EV+ AT+ +
Sbjct: 294 ATAMNEMSATIADVANNAESTAKDTKEATREAGLGDKDVHASVDGIHALAKEVEQATQQV 353

Query: 452 QELEAHGHQISTILSTIQNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTH 511
            +L+    QIS + + I  I++QTNLLALNAAIEAARAGEQGRGFAVVADEVR L+ RT 
Sbjct: 354 NKLKEEIMQISEVTAVISAISDQTNLLALNAAIEAARAGEQGRGFAVVADEVRQLASRTR 413

Query: 512 ASTKEIQQMIETLQATTGKAVGIMDDSRRLADTSVDDANEASVSLEQIHKTVERISDMAT 571
            ST+EIQ  I  LQ     A   MD SR LA+ SVD + +A   L  I   ++ +SDMAT
Sbjct: 414 QSTEEIQNTISLLQQRAVSAANAMDTSRDLAEKSVDQSTKAGNDLSLIVTHIKHVSDMAT 473

Query: 572 QIASAAEEQASVTSEITRNTVGIRDVSNDLAQEAHSAAEQAAELSELSHELEQEIRRFKL 631
           QIA+AAEEQ++V  E+ RN  GI   + ++++ A   A+++  L+ELS  L  ++  FKL
Sbjct: 474 QIATAAEEQSAVAEEMNRNVCGINSSALEVSESATYLAQESESLAELSLNLNNKLAAFKL 533