Pairwise Alignments

Query, 631 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 543 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  233 bits (594), Expect = 2e-65
 Identities = 129/351 (36%), Positives = 206/351 (58%)

Query: 281 ITTALLITVIVVVIVSWLVSFLFRDLGRVSKALEEIASGDADLTQRLEPRSDDEVGQLAS 340
           +T A L+ ++ +VI  +    +   +  ++  + +I  GD +LTQR+     DE+G+LA+
Sbjct: 192 VTIATLVAIVALVIAYFGPKIIVNAIRDITDRINDIVDGDGNLTQRIPITRQDEIGELAN 251

Query: 341 NFNTFVSNMHTMVLKLSHVSAALAQQSKVTAAQAEERSSRIRLQQDEINMVATAINEMAA 400
            FN FV+ +  MV+ +   +  ++Q  +  A ++         Q+  ++ + TA+NEM+A
Sbjct: 252 AFNLFVAQLQQMVIAIISQTKDVSQTVENLATKSTTTIGISYEQEQFVDTIVTAVNEMSA 311

Query: 401 ATQEIAGNADHTAQNAGEAVTACVHGAGQVTQTQRSIQSLAEEVQVATEVIQELEAHGHQ 460
           A +E+A NA HTA    +     + G   +TQ+   IQ L+E V+ A  VI++L  +   
Sbjct: 312 AVREVASNALHTATEITKVNDQTIEGKNILTQSVNHIQQLSESVKQAVAVIEKLSVNSAN 371

Query: 461 ISTILSTIQNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTKEIQQM 520
           I+++L  I++IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR L+ RT  ST++IQ+M
Sbjct: 372 IASVLDVIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTETSTQDIQRM 431

Query: 521 IETLQATTGKAVGIMDDSRRLADTSVDDANEASVSLEQIHKTVERISDMATQIASAAEEQ 580
           IE LQ     AV  ++    L +++V  A++   +L++I  +  ++S+M+TQ A+A EEQ
Sbjct: 432 IEELQRGVNDAVKSIESGASLTNSTVTLASQTQDALDEILNSTSKVSEMSTQTATATEEQ 491

Query: 581 ASVTSEITRNTVGIRDVSNDLAQEAHSAAEQAAELSELSHELEQEIRRFKL 631
             VT EI RN   + D +           +       +   L++E+ RFK+
Sbjct: 492 THVTEEINRNLTELSDKTRYCNTVIQETQQIVVNTQTICSNLQKEVSRFKV 542