Pairwise Alignments

Query, 631 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 630 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  501 bits (1290), Expect = e-146
 Identities = 288/631 (45%), Positives = 391/631 (61%), Gaps = 5/631 (0%)

Query: 5   MKLTLKHKLIGASLSAVVVMATALTWFSASQLQQQTSNAVYTRADAISSTAAKGISDWIS 64
           M+ TLK +L+ +SL AV++    L   S+  ++           D +++T A+GI  W+ 
Sbjct: 1   MRSTLKTRLLFSSLFAVLITVAVLVSISSYFIRNNALENTQHEIDQLANTFAEGIGLWMQ 60

Query: 65  IRKSISTAFNAHIEAQ---NVVPYLQQARNAGGFDDIFYGTTDGAMYRSHPERNRADYDP 121
            RK   T+    IEA     + PYL QA N  GF   ++G   G MYR  P  N A+YDP
Sbjct: 61  DRKMAITSLKKTIEADPSVQITPYLLQAHNGMGFALTYFGDEQGNMYRQDPALNVANYDP 120

Query: 122 RTRPWYKDAASAGKQIITTAYSDAITGALLVTIAEPVRLNGNMSGVVGADVLIDQLIADV 181
           R RPWY DA +A   ++T  Y  A     +VTIAEPV ++G++ GV  A++ IDQL   V
Sbjct: 121 RIRPWYMDAKAANAIVMTAPYVSATLKKQVVTIAEPVTVSGSLFGVAAANLTIDQLTDAV 180

Query: 182 ISMDAGKNAQTMLIDGQNGSFLAHPDKSLLLKPVTTLSSALDMRTIERAANQGELLALKL 241
             +       T+++D + G  ++HP   L  + +  + ++     + + AN   L   +L
Sbjct: 181 QRLQVPGKGYTIMVD-KTGLIISHPKSQLNNEQLNKIDNSFTPSWLSQRANANTLEEREL 239

Query: 242 NGVEKFFFFTAVPDTPWYFAVQMDSDTEYASHSELLTGLITTALLITVIVVVIVSWLVSF 301
           +G  +  +  AVP T W     M+ D   +  + L   +      + VI  +++  +   
Sbjct: 240 DGETQLIYVAAVPSTDWELVFVMNKDEIMSQATTLAWWMSAVGAGLLVIFGLVLVAIFKI 299

Query: 302 LFRDLGRVSKALEEIASGDADLTQRLEP-RSDDEVGQLASNFNTFVSNMHTMVLKLSHVS 360
            F+DL RV+ AL +IA GD DLT R+    S DE+G LAS FN FV  +H M+ ++  ++
Sbjct: 300 QFKDLERVALALNDIAEGDGDLTVRIHTANSHDEIGILASGFNRFVERLHGMISRMHKIA 359

Query: 361 AALAQQSKVTAAQAEERSSRIRLQQDEINMVATAINEMAAATQEIAGNADHTAQNAGEAV 420
             L  Q++ ++A A + S RI +QQDE+ MVATA+ EMA+AT+EIA NA+HTAQ A +AV
Sbjct: 360 GQLEYQAQGSSASATDNSQRIAVQQDEVTMVATAVTEMASATEEIASNAEHTAQTAQDAV 419

Query: 421 TACVHGAGQVTQTQRSIQSLAEEVQVATEVIQELEAHGHQISTILSTIQNIAEQTNLLAL 480
               HG  QV Q+Q+SI++LA EV+ A  +I EL  H  +I++IL TI  IAEQTNLLAL
Sbjct: 420 GLSNHGQKQVMQSQQSIRNLANEVETAGRIISELNEHSQKINSILLTISGIAEQTNLLAL 479

Query: 481 NAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTKEIQQMIETLQATTGKAVGIMDDSRR 540
           NAAIEAARAGEQGRGFAVVADEVRVLSQRTH+ST+EIQ MIETLQ T GKAV  M  S  
Sbjct: 480 NAAIEAARAGEQGRGFAVVADEVRVLSQRTHSSTQEIQAMIETLQQTAGKAVKSMTQSHD 539

Query: 541 LADTSVDDANEASVSLEQIHKTVERISDMATQIASAAEEQASVTSEITRNTVGIRDVSND 600
           +A+TSV DAN AS SL QI K +  ISDMA+QIA+AAEEQ SVTSEI RNT  IR+VS +
Sbjct: 540 MAETSVADANSASESLLQISKAINEISDMASQIATAAEEQTSVTSEINRNTESIREVSEN 599

Query: 601 LAQEAHSAAEQAAELSELSHELEQEIRRFKL 631
           L+ EA S+  QA EL+ L+  L+QE+ RFKL
Sbjct: 600 LSIEAQSSMVQAQELAHLAASLQQEVGRFKL 630