Pairwise Alignments

Query, 545 a.a., glucan biosynthesis protein G from Vibrio cholerae E7946 ATCC 55056

Subject, 528 a.a., periplasmic glucans biosynthesis protein MdoG (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  390 bits (1002), Expect = e-113
 Identities = 204/486 (41%), Positives = 293/486 (60%), Gaps = 13/486 (2%)

Query: 62  NVVRFAKTGSFDNDTVVRLARQLAKKPYVALKDPLPESLANISYDEYRDIRFKPDSAVWK 121
           NV    K   F +D V+ LA QLA+KP+   +   P+ L ++ Y  Y  I ++ ++A+W 
Sbjct: 46  NVSDEKKAKPFTHDNVIDLAMQLAQKPFKEARKA-PKELIDLDYATYGKINYQENAAIWG 104

Query: 122 ADGLPYQMQLFHRGFFFQDLIEIALVEGNQATHLSYDPNMFTAGEVLQQNLPTEDIGYSG 181
                + +QLF  GF +++L++I +VE ++A  +    + F+      + L T+   Y+G
Sbjct: 105 GTPTKFSVQLFAPGFLYKNLVDIDVVENSRAFPIELTESSFSVPNDTIEKLLTQVGQYAG 164

Query: 182 LRVHYPLNSPSYFDELFVFQGASYFRALGKGNAYGLSARGLAIKTADPAGEEFPIFRAFW 241
           +R+HYP+N     DE  +FQGASYFRAL KG  YGLS RGLAI  A P GEE+P+F+ FW
Sbjct: 165 VRLHYPINDDEVKDEFIMFQGASYFRALSKGQTYGLSNRGLAIDVAQPKGEEYPLFKRFW 224

Query: 242 VEKPNYDTNLIVVHALLDSPSVSGAYRFSIRPGENTRMDVEAVLFPRVELSKVGLAPATS 301
           +E+P+     IVVHALLDS SV+GAYRF I PG  TR+DV+  LFPR +++ VGLAP TS
Sbjct: 225 IERPSKYQTAIVVHALLDSQSVTGAYRFGIYPGAPTRVDVDVTLFPRRDIAHVGLAPLTS 284

Query: 302 MFMHSPNGREKTDDFRPSVHDSDGLLMINGRGERLWRPLANPSTLQVSAFMDNSPQGFGL 361
           MF++         D+RP+VH+S+GL +  G GERLWRPL NP+ LQ+SAF D   +GFGL
Sbjct: 285 MFLYGGLDTPDKPDYRPAVHNSEGLQIDRGNGERLWRPLNNPNKLQISAFGDEDIKGFGL 344

Query: 362 MQRERDYANYQDLEAHYEKRPSLWVEPVGNWGPGAVVLTEIPTQSEIHDNIVAFWKPAQP 421
           +QR R++  YQDL A+Y++RPS W+EP+ +WG G ++L EIP+ +E +DNIVA+W+P   
Sbjct: 345 IQRHRNFDYYQDLGANYQQRPSAWIEPLNDWGKGQLILLEIPSNAETNDNIVAYWEPQGG 404

Query: 422 LAAGSEYRFSYHLNWGAQPEANPQAITVSRTASGRADIAKPTPKRLFVIDYQVQGAKPAQ 481
           L     YR+SY +       +      V R++ G+    K    +  +IDY     KP  
Sbjct: 405 LKQAEPYRYSYRITASNDSPSFTNKARVIRSSKGQ----KQAKGKELLIDY--SNIKPQD 458

Query: 482 MPEPKVRSNAGVISNVVLRD----NPANNGYRLSFEFDPGEVTLAELRAELTLQEARPVE 537
           +   K+  +A +    +L      +P  NG R+   F+P    +AELR +L   E     
Sbjct: 459 I--EKITIDASISKGKILSSRIVAHPEINGARIFITFEPESTNVAELRIQLRKDEKPVAA 516

Query: 538 TWLYRW 543
           TWLYRW
Sbjct: 517 TWLYRW 522