Pairwise Alignments

Query, 340 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 339 a.a., Ribose operon repressor from Pseudomonas fluorescens FW300-N2E2

 Score =  160 bits (404), Expect = 6e-44
 Identities = 100/334 (29%), Positives = 170/334 (50%), Gaps = 4/334 (1%)

Query: 1   MARIKDVAELAGVNRSTVSRIINGEGKFKEETRRKVEQAMAQLNYRPSAIARSLATSSSN 60
           MA IKDVA LAG++ +TVS ++N      EE R KVE A+ +L+Y PSA+ARSL   ++ 
Sbjct: 1   MATIKDVAALAGISYTTVSHVVNKTRPVSEEVRLKVEAAIERLDYVPSAVARSLKAKTTA 60

Query: 61  MMGLLVTYYTGGFFGEMMEQVQTELDMHHKFLITAQGHHSAQGEREAIQRFHDLRCDGYV 120
            +GLLV      +F E+   ++   + +   +I      +   +R  ++   + R DG +
Sbjct: 61  TIGLLVPNSLNPYFAELARGIEDYCERNGYCVILCNSDDNPDKQRSYLRVLLEKRIDGLI 120

Query: 121 LHSRYLSDDDLRALAQQPTPFVLLDRYVAGLEERCITFDHRGASQIVVEYLIQQGHRKIA 180
             S          L+   TP V++DR + G++   +  DH   + +   +L++ GHR IA
Sbjct: 121 FASAGGDVGLAEGLSNVRTPMVIVDRGLEGVDADLVRIDHEYGAYLATRHLLELGHRDIA 180

Query: 181 CITGPLHRHNSRLRQQGYLDALAQAGI-LPSKSLCEEGNYGRKSGYFAMQQLFARHPEIT 239
            I GP +   +++R  GY  AL +AGI LP + +  E ++    GY A  QL  + P  +
Sbjct: 181 FIGGPANTSVAQMRLAGYCRALKEAGIELPVERML-ESDFTSTGGYRAAAQLLVQQPP-S 238

Query: 240 AVFSCSEEMTTGALQYLHEQGIAVPGRISIVSFDSVDLCESLYPTVTAVHFPISEMARAA 299
           A+F+ ++ +  G L+   E+ + VP  +S++ FD + +   +YP +T V   I ++   A
Sbjct: 239 AIFAANDMIGIGVLRAAAERNVRVPSELSVIGFDDIQMSRYVYPALTTVGQSILQLGEMA 298

Query: 300 VQSLIAMVKQQPTVGPQSF-RPILKKRHADQPLS 332
            + L+  +        Q    P +  R +  PLS
Sbjct: 299 AEVLLRRIATPGLATEQRIVTPSIVLRESTAPLS 332