Pairwise Alignments

Query, 340 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 336 a.a., ribose operon transcriptional repressor RbsR from Rahnella sp. WP5

 Score =  161 bits (407), Expect = 3e-44
 Identities = 101/319 (31%), Positives = 166/319 (52%), Gaps = 6/319 (1%)

Query: 1   MARIKDVAELAGVNRSTVSRIINGEGKFKEETRRKVEQAMAQLNYRPSAIARSLATSSSN 60
           MA +KDVA LAGV+ STVS +IN      E    KV  A+ QLNY PSA+ARSL  + + 
Sbjct: 1   MATMKDVARLAGVSTSTVSHVINKNRFVSESIAEKVNAAVEQLNYAPSALARSLKLNQTR 60

Query: 61  MMGLLVTYYTGGFFGEMMEQVQTELDMHHKFLITAQGHHSAQGEREAIQRFHDLRCDGYV 120
            +G+L+T  +  F+ E++  V+         LI     + A+    +++     R DG +
Sbjct: 61  TLGMLLTASSNPFYSEVVRGVERSCYERGYSLILCNTDNDAERMNRSLETLLQKRVDGLL 120

Query: 121 LHSRYLSDDDLRALAQQPT-PFVLLDRYVAGLEERCITFDHRGASQIVVEYLIQQGHRKI 179
           +            +++ P+ P V++D          I  +     ++  E+LI+QG+ +I
Sbjct: 121 IMCTENHRPSKDVISRYPSLPIVMMDWSPFDGAIDIIQDNALLGGEMATEFLIRQGYHRI 180

Query: 180 ACITGPLHRHNSRLRQQGYLDALAQAG--ILPSKSLCEEGNYGRKSGYFAMQQLFARHPE 237
           ACITGPL +  ++ R  GY  A+ +AG  ILP   +C +  +  + G  AMQQL A    
Sbjct: 181 ACITGPLDKTTAQERLSGYRQAMEKAGLKILPGYEVCSDFEF--EGGLAAMQQLLALPEP 238

Query: 238 ITAVFSCSEEMTTGALQYLHEQGIAVPGRISIVSFDSVDLCESLYPTVTAVHFPISEMAR 297
             AVF+ ++ M  G  Q L+++G+ VP  ++++ +D + L + + P +T +H P   +  
Sbjct: 239 PHAVFASNDAMAVGVYQALYQRGLRVPDDVAVMGYDDIQLAQYMMPPLTTIHQPKDSLGE 298

Query: 298 AAVQSLIAMVKQQPTVGPQ 316
            AV +L+  + Q P   PQ
Sbjct: 299 LAVDALLHRL-QDPASEPQ 316