Pairwise Alignments

Query, 340 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 341 a.a., putative transcriptional regulator, lacI family from Phaeobacter inhibens DSM 17395

 Score =  148 bits (373), Expect = 2e-40
 Identities = 93/306 (30%), Positives = 152/306 (49%), Gaps = 1/306 (0%)

Query: 4   IKDVAELAGVNRSTVSRIINGEGKFKEETRRKVEQAMAQLNYRPSAIARSLATSSSNMMG 63
           + DVA+ AGV+ +TVSR +N   +  E TR +V QA+  L Y P+  AR +A   S  +G
Sbjct: 10  LNDVAKAAGVSTATVSRCLNSPDRVVETTRHRVMQAVESLGYTPNFAARVMAAKRSFTIG 69

Query: 64  LLVTYYTGGFFGEMMEQVQTELDMHHKFLITAQGHHSAQGEREAIQRFHDLRCDGYVLHS 123
            ++       F   ++  Q +L      L+ +   +S + E+E I+       DG +L  
Sbjct: 70  AIIPTMDNAIFARGLQAFQDQLREDGYTLLVSSSAYSPEVEKEQIRALVARGADGLLLIG 129

Query: 124 RYLSDDDLRALAQQPTPFVLLDRYVAGLEERCITFDHRGASQIVVEYLIQQGHRKIACIT 183
               +   + L +   P ++   Y     +  + F ++GA + +   ++  GHR IA I+
Sbjct: 130 HEREEQIYQYLEKHRVPVLVAWSYAPERLQPSVGFSNKGAMRDLAHTVVDAGHRHIAMIS 189

Query: 184 GPLHRHN-SRLRQQGYLDALAQAGILPSKSLCEEGNYGRKSGYFAMQQLFARHPEITAVF 242
           G L  ++ ++ R  G  DA+   G+ P+     E  Y  + G  A  +L +R P  T V 
Sbjct: 190 GILQGNDRAQNRVSGVRDAMRSRGLDPAALTLIEAPYEIEKGASAFAELMSRAPRPTVVM 249

Query: 243 SCSEEMTTGALQYLHEQGIAVPGRISIVSFDSVDLCESLYPTVTAVHFPISEMARAAVQS 302
             ++ +  GAL+    +GIAVP  +SI  FD ++L E + P +T VH P  EM R A Q 
Sbjct: 250 CGNDVLAAGALREARSRGIAVPDDVSITGFDDIELAEIVSPALTTVHVPHREMGRKAAQE 309

Query: 303 LIAMVK 308
           LIA+V+
Sbjct: 310 LIAIVE 315