Pairwise Alignments

Query, 340 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 338 a.a., LacI family transcription regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  136 bits (343), Expect = 7e-37
 Identities = 101/323 (31%), Positives = 163/323 (50%), Gaps = 8/323 (2%)

Query: 4   IKDVAELAGVNRSTVSRIINGEGKFKEETRRKVEQAMAQLNYRPSAIARSLATSSSNMMG 63
           I DVA+ AGV+  TVSR+ N E   K+ T  KV +A+  LNY+P+  AR+LA + S  +G
Sbjct: 5   INDVAKYAGVSIKTVSRVTNNEPSVKQATVDKVNEAIKALNYQPNLAARNLAGTKSYAIG 64

Query: 64  LLVTYYTGGFFGEMMEQVQTEL-DMHHKFLITAQGHHSAQGEREAIQRFHDLRCDGYVLH 122
            +       +  +M   + +   D  ++ +I      S     E  Q     R  G VL 
Sbjct: 65  FIYDNPNAYYIIDMQNGILSACKDKGYELVIHPCNAKSDTICDELTQLVKHSRLAGLVL- 123

Query: 123 SRYLSDDD--LRALAQQPTPFVLLDRYVAGLEERCITF---DHRGASQIVVEYLIQQGHR 177
           +  LS+D   L+AL+     +V +       E+  +T    D  GA +I  ++LI  GH+
Sbjct: 124 TPPLSEDPKVLKALSDIEANYVRIIAGEGNKEQDGLTILVNDKFGAVEIT-QHLIDLGHK 182

Query: 178 KIACITGPLHRHNSRLRQQGYLDALAQAGILPSKSLCEEGNYGRKSGYFAMQQLFARHPE 237
           +IA ++G LH  +++ R  GY  AL +  +L ++    EG Y  +SG      LF +   
Sbjct: 183 EIAFLSGDLHHESTKERLLGYKQALTKNRLLLNEDYIIEGKYSFESGVEGANTLFKQKNR 242

Query: 238 ITAVFSCSEEMTTGALQYLHEQGIAVPGRISIVSFDSVDLCESLYPTVTAVHFPISEMAR 297
            TA+ +C++E+  GAL      G+ +PG +SIV F+        +P +T VH P +E+A+
Sbjct: 243 PTAIVACNDEIAAGALFAARLAGLDIPGDLSIVGFEDSPFSRQTWPKLTTVHQPNAEIAQ 302

Query: 298 AAVQSLIAMVKQQPTVGPQSFRP 320
            A + LIA  ++Q     ++F P
Sbjct: 303 VATELLIAKRREQDAKFAKTFTP 325