Pairwise Alignments

Query, 252 a.a., chitooligosaccharide deacetylase from Vibrio cholerae E7946 ATCC 55056

Subject, 260 a.a., Cellobiose phosphotransferase system YdjC-like protein from Pseudomonas fluorescens FW300-N2E2

 Score = 77.8 bits (190), Expect = 2e-19
 Identities = 55/152 (36%), Positives = 73/152 (48%), Gaps = 7/152 (4%)

Query: 3   VIFNADDFGLTQGVNQGIVKAHLDGVVKSTTLMVGMPAEQHAVQLAKQ-LPDLKIGLHLR 61
           VI NADDFGL+   N  I++A   GV+ STT M  MP    A ++A+Q L +  +GLH  
Sbjct: 1   VIVNADDFGLSLSENALILRAFETGVISSTTAMANMPGFDQACEMARQPLLNGHVGLHFN 60

Query: 62  FTAGRPL----TGERNLTDEHGVFTAYRDFWQRR--DYQPEAIYHEAIAQVEHFLKLGLT 115
            + G PL    T      D  G F      +  R       A+  E  AQ +H L  GL 
Sbjct: 61  LSYGPPLGQAITSRAVFCDASGQFDLNLSRYCLRLGSKDLAAVEDELQAQWQHCLDHGLR 120

Query: 116 LSHLDSHHHAHTHPQLAPIIYEVAKKYHVPLR 147
            SHLDSH H H    +  ++   A +  VP+R
Sbjct: 121 PSHLDSHQHVHNIWPIGELVARFAARQGVPIR 152