Pairwise Alignments

Query, 446 a.a., PTS sugar transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 678 a.a., putative diguanylate phosphodiesterase (RefSeq) from Shewanella amazonensis SB2B

 Score =  105 bits (262), Expect = 4e-27
 Identities = 89/393 (22%), Positives = 168/393 (42%), Gaps = 34/393 (8%)

Query: 33  AMRDGFIVAMPFIIVGSFILIFAFPPFAEDTTNVFGRVWLNFATTHFDIIMMPFNMSMGI 92
           A+R+ FI  +PF+++ + + +F  P  A   T +   + +  A   F+ I         +
Sbjct: 15  AVRESFIALLPFLLINALLALF--PVLA---TVLAPELSVYDAFHWFEGISDTLGR---L 66

Query: 93  MTIFVSLGVAYSLAKAYKMDGITSAVLSLMSFLLVAAPAK-----EDSLSMAHMGGTGIF 147
             +   L ++Y  AK   +  + SA LSL     +           D L         + 
Sbjct: 67  FPLLAMLSLSYHFAKYLDISAVASATLSLCIIFSLHVHTSGGLVFSDYLLEVLGDPRMVI 126

Query: 148 TAVMCAFFAVELYRFMKKHNITIRMPEQVPPAIARSFEVLLPVLAIFLTLYPLSLFVQAE 207
           T ++ A+      +F + H +      ++   +++   +++P++      Y L + +   
Sbjct: 127 TPILAAYIMRHFLKFPQLHMVR---SAEISAYLSQHLNLIIPMVLT----YTLVVLILKA 179

Query: 208 YGMLIPDAVMAMFKPLISASNTLPAIIGALLVCQLLWFAGIHGAAIVVGLLSPIFLTNIS 267
             +L+   +  M    +     +  ++  +L+  +LW  G+HG    + L+         
Sbjct: 180 MSLLLVLGISPMVDA-VGEFGPMGQLVFRVLLTHMLWCFGVHGDNAFLLLIG-------- 230

Query: 268 ANIDAFVTGQPVPNIFTQPFWDFYIFIGGSGATLALVILMSF-SRSAHLKSIGRMSAVPG 326
              D        PN+    F D ++ +GGSGAT+ L+I +   SR    + + +++    
Sbjct: 231 ---DDNGLRYLAPNLTFSEFMDLFVLLGGSGATIPLLIAIFLESRDEQSRHLAKIAVPFS 287

Query: 327 FFQINEPVIFGSPVVMNPILFLPFVFAPVINATIAYFAIQLGFVGMGVATTPWTTPAIIG 386
              INE +I+G P+V N  L +PFV  P +N  IA+ AI  GF+       PW TP  + 
Sbjct: 288 VVNINEILIYGLPIVFNLRLAIPFVLLPCLNVLIAWMAISAGFLSFDGKPFPWVTPLFLN 347

Query: 387 ASWGSGWTFTPVLLVVGLLILDLLIYLPFFKMF 419
             W +   FT V L + L+ + + IY PF + +
Sbjct: 348 -GWIASGGFTVVALQLFLVTVGVFIYRPFIRKY 379