Pairwise Alignments

Query, 446 a.a., PTS sugar transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., PTS system lactose/cellobiose family transporter subunit IIC from Klebsiella michiganensis M5al

 Score =  226 bits (575), Expect = 1e-63
 Identities = 139/454 (30%), Positives = 230/454 (50%), Gaps = 29/454 (6%)

Query: 4   MKLYDAIIGIVEKHIAPIAAKVGNQPHVRAMRDGFIVAMPFIIVGSFILIFAFPPFAEDT 63
           M L D +I      +   A K  +  ++ A++  FI  MP IIVG+F ++ +      D 
Sbjct: 1   MALQDKLID----SLGSFATKFNSYRYIMAIKSAFITLMPVIIVGAFSVLIS--NMVLDP 54

Query: 64  TNVFGRVWLNFATTHFDIIMMPFNMSMGIMTI-FVSLGVAYSLA-KAYKMDGITS---AV 118
            N       +F    F   + P   ++   T+ F+++G  + +  +  +++GI S    +
Sbjct: 55  KNGLA----SFQALSFLAALKPITSAINYATLNFLNIGAVFLIGIELGRINGIKSLFPGL 110

Query: 119 LSLMSFLLVAAPAKE-----------DSLSMAHMGGTGIFTAVMCAFFAVELYRFMK-KH 166
           L+++ F+ V     E           D L         +F  +  A  +VE+Y +++ + 
Sbjct: 111 LAVICFICVTPTTVEMMVDGQMHEVKDVLLRQFSDTRSLFLGMFIAILSVEIYCWLEGRK 170

Query: 167 NITIRMPEQVPPAIARSFEVLLPVLAIFLTLYPLSLFVQAEYGMLIPDAVMAMFK-PLIS 225
            + I+MP+ VPP ++ SF  L+P +     +           GM + DAV  + + PL  
Sbjct: 171 GLKIKMPDTVPPNVSASFSALIPAIITTTVIATFGFIFHQATGMYLYDAVYQVVQQPLER 230

Query: 226 ASNTLPAIIGALLVCQLLWFAGIHGAAIVVGLLSPIFLTNISANIDAFVTGQPVPNIFTQ 285
              +LP I+  + V QL W  GIHG  ++  +  P+ L  I+ N+ AF  G+ VPNI T 
Sbjct: 231 VVQSLPGILLLMFVAQLFWVIGIHGNQMIKPIREPLLLGAIAVNMSAFEQGKEVPNIITM 290

Query: 286 PFWDFYIFIGGSGATLALVI-LMSFSRSAHLKSIGRMSAVPGFFQINEPVIFGSPVVMNP 344
           PFWD Y+ IGGSG T+ L+I +M  ++   +K I ++S  PG F INEPVIFG P+++NP
Sbjct: 291 PFWDVYMSIGGSGLTIGLLIAVMIATKRKEMKEIAKLSIGPGLFNINEPVIFGMPIMLNP 350

Query: 345 ILFLPFVFAPVINATIAYFAIQLGFVGMGVATTPWTTPAIIGASWGSGWTFTPVLLVVGL 404
           IL +PF+  P++  +I YFA   GF G  V   PWTTP +I A   +  +   V+  +  
Sbjct: 351 ILAIPFIITPLVTGSIGYFATAAGFAGKAVVMVPWTTPPLINAWLSTAGSMGAVVTQLIC 410

Query: 405 LILDLLIYLPFFKMFEKQVLEQEQPVESKVKAAQ 438
           ++  +LIYLPF K+  ++    ++  E+   + Q
Sbjct: 411 ILTAVLIYLPFVKIASRRAENAQRQAENTPTSQQ 444