Pairwise Alignments

Query, 540 a.a., BCCT family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 677 a.a., high-affinity choline transporter BetT from Klebsiella michiganensis M5al

 Score =  336 bits (862), Expect = 1e-96
 Identities = 186/511 (36%), Positives = 298/511 (58%), Gaps = 17/511 (3%)

Query: 34  DVHNPV-FGISAGLIAAFLLLTVLV-DAHQAKIGLDTVKQSIIASFDWLFIWSGNLFLLF 91
           D  NPV F  SAGLI  F L+T+   D   A IG       +  +F W ++ +  L+++F
Sbjct: 11  DKINPVVFYTSAGLILLFSLMTLFFSDFSAAWIG--RTLNWVSRTFGWYYLLAATLYIVF 68

Query: 92  CVGLVISPFGKIRLGGQAAKADHSFLSWLAMLFAAGMGIGLMFWSVAEPVAYYTGWYETP 151
            V +  S FG ++LG + +K + S LSW AMLFAAG+GI LMF+SVAEPV  Y    + P
Sbjct: 69  VVCIACSRFGSVKLGPEHSKPEFSVLSWAAMLFAAGIGIDLMFFSVAEPVTQYM---QPP 125

Query: 152 LGVEANTPQAAQLAMGATMFHWGLHPWAIYGVVALSLAFFCYNKGLPLSMRSVFYPLLGD 211
            G    T +AA+ AM  T+FH+GL  W++Y ++ ++L +F Y   LPL++RS  YP+ G 
Sbjct: 126 EGA-GQTMEAARQAMVWTLFHYGLTGWSMYALMGMALGYFSYRYNLPLTIRSALYPIFGK 184

Query: 212 RAWGWAGHVVDILAVLATLFGLATSLGLGAQQAASGIHHVFGFESGIGLQIAVICVVTGL 271
           +  G  GH VDI AV+ T+FG+AT+LG+G  Q   G+  +F     +G + A+I +   +
Sbjct: 185 KINGPIGHSVDIAAVIGTIFGIATTLGIGVVQLNYGLSVLFNIPDSLGAKAALIVLSVII 244

Query: 272 ATLSVVRGIDGGVKVISNINMIVAFLLLALVAVIG-YSVTLTSIPTTLMAYLQNLIPLS- 329
           AT+SV  G+D G++++S +N+++A  L+  +  +G     L ++   +  Y+   + ++ 
Sbjct: 245 ATISVTSGVDKGIRILSELNVVLALGLILFILFMGDTEFLLNALVLNVGDYVNRFMGMTL 304

Query: 330 NPHGREDEV-WFQGWTVFYWAWWISWSPFVGMFIARVSKGRTIREFIVAVLLIPTLVTLV 388
           N    +  V W   WT+F+WAWW++WSPFVG+F+AR+S+GRTIR+F+V  L+IP   TL+
Sbjct: 305 NSFAFDRPVEWMNNWTLFFWAWWVAWSPFVGLFLARISRGRTIRQFVVGTLIIPFTFTLL 364

Query: 389 WMSVFGGLAVDQVINEIGVLGQNGLTDVSLAMFQMFDSLVFGKVLSVIAVVLVLVFFITS 448
           W+SVFG  A+ ++I+         +       + +          + +A +  L+F++TS
Sbjct: 365 WLSVFGNSALYEIIHGNAAFAAEAVAHPERGFYNLLAQYPAFTFSASVATITGLLFYVTS 424

Query: 449 SDSGSLVIDSITSGGK---LDSPVLQRVFWAVLEGAVAVALLWIGGTEAVQALQAGVIST 505
           +DSG+LV+ + TS  K    D+P   R+FW+V+ G + + +L    T  + ALQ   +  
Sbjct: 425 ADSGALVLGNFTSKLKDINSDAPNWLRIFWSVVIGLLTLGMLM---TNGISALQNATVIM 481

Query: 506 ALPFTVILLLMCVSLWKGLKTEPEFMASSKR 536
            LPF+ ++  +   L+K LK E     S+ R
Sbjct: 482 GLPFSFVIFFVMAGLYKSLKVEDYRRESANR 512