Pairwise Alignments

Query, 540 a.a., BCCT family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 621 a.a., BCCT transporter (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  231 bits (588), Expect = 8e-65
 Identities = 167/568 (29%), Positives = 277/568 (48%), Gaps = 89/568 (15%)

Query: 42  ISAGLIAAFLLLTVLVDAHQAKIGLDTVKQSIIASFDWLFIWSGNLFLLFCVGLVISPF- 100
           I+  L+   L+L  +    QA   L  +   I+A+F+  ++++   F++ C  L + P  
Sbjct: 29  ITGKLLVGGLILWAIAFPDQAASVLGALNSIILATFNIWYVYTMAFFVILCFALALWPTA 88

Query: 101 GKIRLGGQAAKADHSFLSWLAMLFAAGMGIGLMFWSVAEPVAYYTGWYETPLG-VEANTP 159
           GK+RLG    + + S  SW +M+F AG+GIG++ ++ AEP+ ++     T +G  E +T 
Sbjct: 89  GKLRLGHDDDRPEFSNFSWFSMMFGAGIGIGMLTFATAEPMYHFGANPATIMGDTEGSTA 148

Query: 160 QAAQLAMGATMFHWGLHPWAIYGVVALSLAFFCYNKGLPLSMRSVFYPLLGDRAWGWAGH 219
              + A   +  HWGL  WA Y +V L+L +FCY +GLPL++RS   P+ G++  G  GH
Sbjct: 149 GNVRDAYIWSFTHWGLAAWASYAIVGLALGYFCYRRGLPLTIRSALTPIFGNKLSGPVGH 208

Query: 220 VVD-------ILAVLATL-FG------------------------------------LAT 235
           VVD       +L V  TL FG                                    L  
Sbjct: 209 VVDIVAVVATVLGVSQTLGFGVEQFIAGLSRIGVGDWLYTATADGGQTSSTMGIIVALCV 268

Query: 236 SLGLGAQQAASGIHHVFGFESGIGLQIAVICVVT---------GLATLSVVRGIDGGVKV 286
            +GL    A SG+     + S + + ++   ++          GL TL V    D  V +
Sbjct: 269 IMGLSTLSALSGVGKGIKWLSNLNMGLSFFVLIFFLIFGSTFFGLQTLFVGM-FDYLVSI 327

Query: 287 ISNINMI-VAFLLLALVAVIGYSV-------------TLTSIPTTLMAYLQNL------I 326
             NI  + V     A++A +  SV             + TS   TL ++ + L      +
Sbjct: 328 PGNIFTVWVGAPAEAIIASVPASVQALPAEDLAAMVESATSPWGTLASFTEGLPASAAAL 387

Query: 327 PLSN-----PHGREDEV--WFQGWTVFYWAWWISWSPFVGMFIARVSKGRTIREFIVAVL 379
           P ++         E+ +  W   WT+FYWAWWI+++PFVG+F+AR+SKGRT+RE+++  +
Sbjct: 388 PAADIAAVYAAATENRLSGWQGAWTIFYWAWWIAFAPFVGVFLARISKGRTVREYVLGAM 447

Query: 380 LIPTLVTLVWMSVFGGLAVDQVINEI--GVLGQNGLTDVSLAMFQMFDSLVFGKVLSVIA 437
           +IP ++  VW ++ GG A+D  +  +  G +   G  D   AM  +  S      +SV+ 
Sbjct: 448 IIPAIMCFVWFALVGGTAIDLELRGVADGAIQGAGQADQLFAMLAVMLSEGLAYAMSVLI 507

Query: 438 VVLVLVFFITSSDSGSLVIDSITSGGKLDSPVLQRV-FWAVLEGAVAVALLWIGGTEAVQ 496
           V+L+L + +TS+DS  L+I++I + G         + FW      V   L+  GG   + 
Sbjct: 508 VILLLTYLVTSADSAVLIINTINAAGDEGPKARPHILFWGAALALVVGGLIIAGG---LG 564

Query: 497 ALQAGVISTALPFTVILLLMCVSLWKGL 524
           A+Q  ++  ALPF+V+++LM +SL K +
Sbjct: 565 AIQTAMVIGALPFSVVMVLMGLSLIKAV 592