Pairwise Alignments

Query, 216 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 217 a.a., Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain from Pseudomonas stutzeri RCH2

 Score =  135 bits (341), Expect = 4e-37
 Identities = 70/210 (33%), Positives = 125/210 (59%), Gaps = 4/210 (1%)

Query: 10  RVVMVDDHQVVLDGFIARLEQEPEIEVVATASNGLEALELVKLHQPDVVLMDVSMPIMNG 69
           RV +VDDH +V  G  A +E +P  EVVA   +G +   +++  +PD++L+D+SM  M G
Sbjct: 4   RVALVDDHALVRAGLRALVEDQPGYEVVAEGGDGQDVEAILRQARPDILLLDLSMKHMGG 63

Query: 70  IEATRLIKEEVPHTKVLMLTMHDNREYIMQVMQAGAMGYMLKEISALKMVQAIKTVHQGA 129
           ++A R    + P  +VL+L+MH   +Y++  ++ GA GY+LK+ +A ++  A++ + +  
Sbjct: 64  LDALRQWHGQYPDVQVLILSMHATADYVLAALRLGARGYLLKDAAAQELDMALQALSRNE 123

Query: 130 TYFCESTTSTLFSQEILPVANKPNP----LSRREEAILRMVAQGCSSKKIATLLNISYRT 185
           +Y       T+ S  I+   ++       L+ R+  ILR++A+G S++ IA  L +S +T
Sbjct: 124 SYLSPGIAQTVISSAIVEGRSRETSLAPVLTPRQIEILRLIARGVSTRDIAAGLGLSVKT 183

Query: 186 VETHRQNIKHKLDIHSTAELAQYALQHGLL 215
           V+THR  I  +L++H    L  YA++ GL+
Sbjct: 184 VDTHRAQIMARLNLHDVPSLVLYAVRQGLI 213