Pairwise Alignments

Query, 216 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 215 a.a., response regulator receiver protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  134 bits (337), Expect = 1e-36
 Identities = 72/208 (34%), Positives = 129/208 (62%), Gaps = 3/208 (1%)

Query: 11  VVMVDDHQVVLDGFIARLEQEPEIEVVATASNGLEALELVKLHQPDVVLMDVSMPIMNGI 70
           VV+VDDH++V  G    L     IEV+    +GLEA+ LV+  +P ++++D+S+  ++G+
Sbjct: 7   VVLVDDHELVRAGIRTLLHTIDSIEVIGECGDGLEAVALVRRLKPKLLVLDISIKSLSGM 66

Query: 71  EATRLIKEEVPHTKVLMLTMHDNREYIMQVMQAGAMGYMLKEISALKMVQAIKTVHQGAT 130
           E  +LI  +    K+L+L+MH+N EY+ + ++ GA GY+LK+ +  ++  AI  V  G +
Sbjct: 67  EVVKLISNQAIPVKILILSMHNNVEYVAKCLKNGAHGYLLKDAAVDELEPAITNVLLGHS 126

Query: 131 YFCESTTSTLFSQEILPVANKPN---PLSRREEAILRMVAQGCSSKKIATLLNISYRTVE 187
           Y  +    +L  Q +    + P+    L+ R++ IL+++A+G S+++IA  +++S +TVE
Sbjct: 127 YISKEIDISLLEQLLSTNQSAPSLLELLTNRQKQILQLIAEGYSTRQIAESISVSIKTVE 186

Query: 188 THRQNIKHKLDIHSTAELAQYALQHGLL 215
           THR +I  +L I   A L ++ALQ  L+
Sbjct: 187 THRAHIMARLQIFDIAGLVRFALQEKLI 214