Pairwise Alignments

Query, 216 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 223 a.a., response regulator transcription factor from Rhodopseudomonas palustris CGA009

 Score =  125 bits (314), Expect = 6e-34
 Identities = 77/215 (35%), Positives = 117/215 (54%), Gaps = 11/215 (5%)

Query: 9   IRVVMVDDHQVVLDGFIARLEQEPEIEVVATASNGLEALELVKLHQPDVVLMDVSMPIMN 68
           +RV + DDH VVL G  A +  +P +EVV  AS+G  AL      +PDV ++D+SMP +N
Sbjct: 9   LRVFIADDHPVVLSGMKALVAGDPGLEVVGEASDGPNALRRATELKPDVAVLDLSMPGLN 68

Query: 69  GIEATRLIKEEVPHTKVLMLTMHDNREYIMQVMQAGAMGYMLKEISALKMVQAIKTVHQG 128
           GIE  R      P  +VL+LT+H++  Y+ Q++  G  GY+LK  +  ++++ I  V  G
Sbjct: 69  GIEVARKFLATCPDCRVLVLTVHEDGAYLRQLLDLGVAGYVLKRSATEELIRGIHAVGSG 128

Query: 129 ATYFCES--------TTSTLFSQEILPVANKPNPLSRREEAILRMVAQGCSSKKIATLLN 180
             Y   +        TT  L + +     N  + LS RE  +LR+ A G S+K IA  L 
Sbjct: 129 GIYLDPAIAGRAIGRTTPHLHNGD---EHNAVSELSTREIEVLRLAAIGHSNKTIAAKLQ 185

Query: 181 ISYRTVETHRQNIKHKLDIHSTAELAQYALQHGLL 215
           I  ++VET++     KL  H+  E+ ++AL  G L
Sbjct: 186 IGAKSVETYKARGMAKLGFHNRVEVVRFALSMGWL 220